Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS01845

Experiment: LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS01840 and BWI76_RS01845 are separated by 98 nucleotidesBWI76_RS01845 and BWI76_RS01850 are separated by 107 nucleotides BWI76_RS01840: BWI76_RS01840 - maltose ABC transporter, ATPase component (MalK) (from data), at 374,860 to 375,969 _RS01840 BWI76_RS01845: BWI76_RS01845 - maltoporin, at 376,068 to 377,354 _RS01845 BWI76_RS01850: BWI76_RS01850 - maltose operon protein MalM, at 377,462 to 378,394 _RS01850 Position (kb) 376 377 378Strain fitness (log2 ratio) -2 -1 0 1at 375.168 kb on - strand, within BWI76_RS01840at 375.681 kb on + strand, within BWI76_RS01840at 375.924 kb on + strandat 375.995 kb on + strandat 376.139 kb on + strandat 376.347 kb on - strand, within BWI76_RS01845at 376.375 kb on + strand, within BWI76_RS01845at 376.547 kb on - strand, within BWI76_RS01845at 376.708 kb on + strand, within BWI76_RS01845at 376.708 kb on + strand, within BWI76_RS01845at 376.733 kb on - strand, within BWI76_RS01845at 376.786 kb on + strand, within BWI76_RS01845at 376.932 kb on + strand, within BWI76_RS01845at 377.030 kb on + strand, within BWI76_RS01845at 377.195 kb on - strand, within BWI76_RS01845at 377.487 kb on + strandat 377.608 kb on + strand, within BWI76_RS01850at 377.782 kb on - strand, within BWI76_RS01850at 377.998 kb on + strand, within BWI76_RS01850at 377.998 kb on + strand, within BWI76_RS01850at 377.998 kb on + strand, within BWI76_RS01850at 378.006 kb on - strand, within BWI76_RS01850at 378.093 kb on + strand, within BWI76_RS01850at 378.108 kb on + strand, within BWI76_RS01850

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Per-strain Table

Position Strand Gene LocusTag Fraction LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
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375,168 - BWI76_RS01840 0.28 +0.5
375,681 + BWI76_RS01840 0.74 +0.5
375,924 + +0.1
375,995 + +0.0
376,139 + +0.7
376,347 - BWI76_RS01845 0.22 -1.2
376,375 + BWI76_RS01845 0.24 -0.6
376,547 - BWI76_RS01845 0.37 -0.4
376,708 + BWI76_RS01845 0.50 -1.6
376,708 + BWI76_RS01845 0.50 +0.8
376,733 - BWI76_RS01845 0.52 -0.2
376,786 + BWI76_RS01845 0.56 -1.8
376,932 + BWI76_RS01845 0.67 -0.3
377,030 + BWI76_RS01845 0.75 -0.6
377,195 - BWI76_RS01845 0.88 +0.3
377,487 + -0.4
377,608 + BWI76_RS01850 0.16 +0.6
377,782 - BWI76_RS01850 0.34 -0.1
377,998 + BWI76_RS01850 0.57 +0.2
377,998 + BWI76_RS01850 0.57 +0.2
377,998 + BWI76_RS01850 0.57 +0.0
378,006 - BWI76_RS01850 0.58 -0.0
378,093 + BWI76_RS01850 0.68 +0.4
378,108 + BWI76_RS01850 0.69 -0.2

Or see this region's nucleotide sequence