Experiment: p-Coumaric (C) and Ammonium chloride (N); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS01840 and PFLU_RS01845 are separated by 185 nucleotides PFLU_RS01845 and PFLU_RS01850 are separated by 220 nucleotides
PFLU_RS01840: PFLU_RS01840 - glucans biosynthesis glucosyltransferase MdoH, at 414,404 to 416,974
_RS01840
PFLU_RS01845: PFLU_RS01845 - transporter substrate-binding domain-containing protein, at 417,160 to 417,960
_RS01845
PFLU_RS01850: PFLU_RS01850 - transporter substrate-binding domain-containing protein, at 418,181 to 418,978
_RS01850
Position (kb) 417
418 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 416.301 kb on + strand, within PFLU_RS01840 at 416.579 kb on + strand, within PFLU_RS01840 at 416.579 kb on + strand, within PFLU_RS01840 at 416.579 kb on + strand, within PFLU_RS01840 at 416.579 kb on + strand, within PFLU_RS01840 at 416.579 kb on + strand, within PFLU_RS01840 at 416.579 kb on + strand, within PFLU_RS01840 at 416.579 kb on + strand, within PFLU_RS01840 at 416.580 kb on - strand, within PFLU_RS01840 at 416.580 kb on - strand, within PFLU_RS01840 at 416.580 kb on - strand, within PFLU_RS01840 at 416.580 kb on - strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 417.025 kb on - strand at 417.025 kb on - strand at 417.025 kb on - strand at 417.057 kb on - strand at 417.099 kb on + strand at 417.099 kb on + strand at 417.099 kb on + strand at 417.100 kb on - strand at 417.123 kb on - strand at 417.123 kb on - strand at 417.123 kb on - strand at 417.123 kb on - strand at 417.139 kb on + strand at 417.173 kb on - strand at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.403 kb on + strand, within PFLU_RS01845 at 417.592 kb on + strand, within PFLU_RS01845 at 417.692 kb on + strand, within PFLU_RS01845 at 417.692 kb on + strand, within PFLU_RS01845 at 417.726 kb on + strand, within PFLU_RS01845 at 417.726 kb on + strand, within PFLU_RS01845 at 417.726 kb on + strand, within PFLU_RS01845 at 417.727 kb on - strand, within PFLU_RS01845 at 417.727 kb on - strand, within PFLU_RS01845 at 417.727 kb on - strand, within PFLU_RS01845 at 417.727 kb on - strand, within PFLU_RS01845 at 417.727 kb on - strand, within PFLU_RS01845 at 417.727 kb on - strand, within PFLU_RS01845 at 417.727 kb on - strand, within PFLU_RS01845 at 417.742 kb on + strand, within PFLU_RS01845 at 417.742 kb on + strand, within PFLU_RS01845 at 417.742 kb on + strand, within PFLU_RS01845 at 417.742 kb on + strand, within PFLU_RS01845 at 417.742 kb on + strand, within PFLU_RS01845 at 417.742 kb on + strand, within PFLU_RS01845 at 417.743 kb on - strand, within PFLU_RS01845 at 417.743 kb on - strand, within PFLU_RS01845 at 417.743 kb on - strand, within PFLU_RS01845 at 417.804 kb on + strand, within PFLU_RS01845 at 417.804 kb on + strand, within PFLU_RS01845 at 417.804 kb on + strand, within PFLU_RS01845 at 417.804 kb on + strand, within PFLU_RS01845 at 417.805 kb on - strand, within PFLU_RS01845 at 417.805 kb on - strand, within PFLU_RS01845 at 417.901 kb on + strand at 417.901 kb on + strand at 417.901 kb on + strand at 417.901 kb on + strand at 417.901 kb on + strand at 417.901 kb on + strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.928 kb on - strand at 417.967 kb on + strand at 417.967 kb on + strand at 417.968 kb on - strand at 417.975 kb on + strand at 417.975 kb on + strand at 417.976 kb on - strand at 417.976 kb on - strand at 418.008 kb on + strand at 418.008 kb on + strand at 418.008 kb on + strand at 418.008 kb on + strand at 418.008 kb on + strand at 418.009 kb on - strand at 418.009 kb on - strand at 418.009 kb on - strand at 418.009 kb on - strand at 418.009 kb on - strand at 418.058 kb on + strand at 418.058 kb on + strand at 418.058 kb on + strand at 418.058 kb on + strand at 418.058 kb on + strand at 418.058 kb on + strand at 418.059 kb on - strand at 418.059 kb on - strand at 418.059 kb on - strand at 418.059 kb on - strand at 418.059 kb on - strand at 418.073 kb on + strand at 418.110 kb on - strand at 418.155 kb on - strand at 418.190 kb on + strand at 418.191 kb on - strand at 418.191 kb on - strand at 418.191 kb on - strand at 418.191 kb on - strand at 418.307 kb on + strand, within PFLU_RS01850 at 418.307 kb on + strand, within PFLU_RS01850 at 418.307 kb on + strand, within PFLU_RS01850 at 418.307 kb on + strand, within PFLU_RS01850 at 418.307 kb on + strand, within PFLU_RS01850 at 418.307 kb on + strand, within PFLU_RS01850 at 418.307 kb on + strand, within PFLU_RS01850 at 418.307 kb on + strand, within PFLU_RS01850 at 418.308 kb on - strand, within PFLU_RS01850 at 418.308 kb on - strand, within PFLU_RS01850 at 418.308 kb on - strand, within PFLU_RS01850 at 418.308 kb on - strand, within PFLU_RS01850 at 418.308 kb on - strand, within PFLU_RS01850 at 418.308 kb on - strand, within PFLU_RS01850 at 418.432 kb on + strand, within PFLU_RS01850 at 418.433 kb on - strand, within PFLU_RS01850 at 418.586 kb on + strand, within PFLU_RS01850 at 418.586 kb on + strand, within PFLU_RS01850 at 418.586 kb on + strand, within PFLU_RS01850 at 418.587 kb on - strand, within PFLU_RS01850 at 418.587 kb on - strand, within PFLU_RS01850 at 418.587 kb on - strand, within PFLU_RS01850 at 418.611 kb on - strand, within PFLU_RS01850 at 418.679 kb on + strand, within PFLU_RS01850 at 418.679 kb on + strand, within PFLU_RS01850 at 418.679 kb on + strand, within PFLU_RS01850 at 418.679 kb on + strand, within PFLU_RS01850 at 418.679 kb on + strand, within PFLU_RS01850 at 418.680 kb on - strand, within PFLU_RS01850 at 418.680 kb on - strand, within PFLU_RS01850 at 418.680 kb on - strand, within PFLU_RS01850 at 418.748 kb on + strand, within PFLU_RS01850 at 418.748 kb on + strand, within PFLU_RS01850 at 418.748 kb on + strand, within PFLU_RS01850 at 418.748 kb on + strand, within PFLU_RS01850 at 418.749 kb on - strand, within PFLU_RS01850 at 418.749 kb on - strand, within PFLU_RS01850 at 418.749 kb on - strand, within PFLU_RS01850 at 418.749 kb on - strand, within PFLU_RS01850 at 418.760 kb on + strand, within PFLU_RS01850 at 418.760 kb on + strand, within PFLU_RS01850 at 418.760 kb on + strand, within PFLU_RS01850 at 418.862 kb on + strand, within PFLU_RS01850 at 418.862 kb on + strand, within PFLU_RS01850 at 418.862 kb on + strand, within PFLU_RS01850 at 418.863 kb on - strand, within PFLU_RS01850 at 418.919 kb on + strand at 418.919 kb on + strand at 418.919 kb on + strand at 418.919 kb on + strand at 418.919 kb on + strand at 418.919 kb on + strand at 418.919 kb on + strand at 418.919 kb on + strand at 418.919 kb on + strand at 418.919 kb on + strand at 418.919 kb on + strand at 418.920 kb on - strand at 418.920 kb on - strand at 418.920 kb on - strand at 418.920 kb on - strand at 418.920 kb on - strand at 418.920 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) and Ammonium chloride (N); with MOPS remove 416,301 + PFLU_RS01840 0.74 +1.5 416,579 + PFLU_RS01840 0.85 +2.1 416,579 + PFLU_RS01840 0.85 +1.8 416,579 + PFLU_RS01840 0.85 +2.4 416,579 + PFLU_RS01840 0.85 +1.3 416,579 + PFLU_RS01840 0.85 +0.6 416,579 + PFLU_RS01840 0.85 -1.1 416,579 + PFLU_RS01840 0.85 +1.0 416,580 - PFLU_RS01840 0.85 +2.2 416,580 - PFLU_RS01840 0.85 +1.9 416,580 - PFLU_RS01840 0.85 +2.1 416,580 - PFLU_RS01840 0.85 +3.4 416,615 + PFLU_RS01840 0.86 +1.5 416,615 + PFLU_RS01840 0.86 +0.7 416,615 + PFLU_RS01840 0.86 +0.8 416,615 + PFLU_RS01840 0.86 +0.4 416,615 + PFLU_RS01840 0.86 -0.8 416,615 + PFLU_RS01840 0.86 +1.5 416,615 + PFLU_RS01840 0.86 +0.8 416,615 + PFLU_RS01840 0.86 +1.0 416,615 + PFLU_RS01840 0.86 +0.9 416,615 + PFLU_RS01840 0.86 +0.7 416,616 - PFLU_RS01840 0.86 +2.6 416,616 - PFLU_RS01840 0.86 +1.4 416,616 - PFLU_RS01840 0.86 +2.1 416,616 - PFLU_RS01840 0.86 +1.4 416,616 - PFLU_RS01840 0.86 +2.5 416,616 - PFLU_RS01840 0.86 +2.0 416,616 - PFLU_RS01840 0.86 +2.2 416,616 - PFLU_RS01840 0.86 +0.7 416,616 - PFLU_RS01840 0.86 +1.2 416,616 - PFLU_RS01840 0.86 -1.1 416,616 - PFLU_RS01840 0.86 +1.3 417,025 - -0.0 417,025 - +0.9 417,025 - -0.1 417,057 - +1.2 417,099 + -0.4 417,099 + +0.4 417,099 + -0.1 417,100 - -1.4 417,123 - -1.8 417,123 - +0.8 417,123 - +1.1 417,123 - +1.0 417,139 + -0.2 417,173 - +0.0 417,289 + PFLU_RS01845 0.16 -0.7 417,289 + PFLU_RS01845 0.16 -2.8 417,289 + PFLU_RS01845 0.16 -0.9 417,289 + PFLU_RS01845 0.16 -0.6 417,289 + PFLU_RS01845 0.16 -0.6 417,289 + PFLU_RS01845 0.16 -1.4 417,289 + PFLU_RS01845 0.16 +1.4 417,289 + PFLU_RS01845 0.16 -0.5 417,289 + PFLU_RS01845 0.16 +0.6 417,289 + PFLU_RS01845 0.16 -0.2 417,289 + PFLU_RS01845 0.16 +1.0 417,289 + PFLU_RS01845 0.16 -1.1 417,289 + PFLU_RS01845 0.16 +0.6 417,289 + PFLU_RS01845 0.16 +0.4 417,289 + PFLU_RS01845 0.16 +1.6 417,289 + PFLU_RS01845 0.16 -0.4 417,289 + PFLU_RS01845 0.16 +0.7 417,289 + PFLU_RS01845 0.16 +0.5 417,289 + PFLU_RS01845 0.16 -1.6 417,290 - PFLU_RS01845 0.16 +1.4 417,290 - PFLU_RS01845 0.16 +1.2 417,290 - PFLU_RS01845 0.16 +0.9 417,290 - PFLU_RS01845 0.16 -1.1 417,290 - PFLU_RS01845 0.16 -1.1 417,290 - PFLU_RS01845 0.16 -1.3 417,290 - PFLU_RS01845 0.16 -0.8 417,290 - PFLU_RS01845 0.16 +2.4 417,290 - PFLU_RS01845 0.16 +0.0 417,290 - PFLU_RS01845 0.16 -0.3 417,290 - PFLU_RS01845 0.16 -0.4 417,290 - PFLU_RS01845 0.16 -0.7 417,290 - PFLU_RS01845 0.16 +1.1 417,290 - PFLU_RS01845 0.16 -0.5 417,403 + PFLU_RS01845 0.30 -1.3 417,592 + PFLU_RS01845 0.54 +0.8 417,692 + PFLU_RS01845 0.66 -1.3 417,692 + PFLU_RS01845 0.66 -0.3 417,726 + PFLU_RS01845 0.71 -1.3 417,726 + PFLU_RS01845 0.71 +0.2 417,726 + PFLU_RS01845 0.71 -1.9 417,727 - PFLU_RS01845 0.71 +2.0 417,727 - PFLU_RS01845 0.71 -1.0 417,727 - PFLU_RS01845 0.71 -0.2 417,727 - PFLU_RS01845 0.71 -0.2 417,727 - PFLU_RS01845 0.71 -0.4 417,727 - PFLU_RS01845 0.71 -0.6 417,727 - PFLU_RS01845 0.71 -0.2 417,742 + PFLU_RS01845 0.73 +0.9 417,742 + PFLU_RS01845 0.73 +0.7 417,742 + PFLU_RS01845 0.73 -1.5 417,742 + PFLU_RS01845 0.73 -1.2 417,742 + PFLU_RS01845 0.73 +2.4 417,742 + PFLU_RS01845 0.73 +0.1 417,743 - PFLU_RS01845 0.73 +0.7 417,743 - PFLU_RS01845 0.73 -1.0 417,743 - PFLU_RS01845 0.73 +0.0 417,804 + PFLU_RS01845 0.80 -0.5 417,804 + PFLU_RS01845 0.80 -1.3 417,804 + PFLU_RS01845 0.80 -2.2 417,804 + PFLU_RS01845 0.80 +0.2 417,805 - PFLU_RS01845 0.81 -1.4 417,805 - PFLU_RS01845 0.81 -0.2 417,901 + +1.4 417,901 + +1.4 417,901 + -0.7 417,901 + -1.3 417,901 + -1.6 417,901 + +2.0 417,902 - -0.1 417,902 - -0.8 417,902 - +1.2 417,902 - +0.8 417,902 - +2.0 417,902 - +0.0 417,902 - +0.4 417,902 - -0.6 417,902 - +1.3 417,902 - -1.4 417,902 - +0.8 417,928 - -2.4 417,967 + -1.2 417,967 + +2.0 417,968 - +0.6 417,975 + -0.6 417,975 + +0.6 417,976 - -0.2 417,976 - -0.6 418,008 + +1.1 418,008 + +0.4 418,008 + -2.0 418,008 + +0.3 418,008 + +0.1 418,009 - +0.6 418,009 - +0.2 418,009 - -0.7 418,009 - -2.6 418,009 - +0.1 418,058 + -0.0 418,058 + +0.8 418,058 + -0.5 418,058 + -1.4 418,058 + +0.6 418,058 + -0.3 418,059 - +0.1 418,059 - +0.5 418,059 - -1.3 418,059 - +0.3 418,059 - -0.8 418,073 + -0.1 418,110 - +0.3 418,155 - +1.0 418,190 + -2.0 418,191 - +1.7 418,191 - +0.6 418,191 - +0.2 418,191 - -1.7 418,307 + PFLU_RS01850 0.16 +1.4 418,307 + PFLU_RS01850 0.16 +0.7 418,307 + PFLU_RS01850 0.16 +0.6 418,307 + PFLU_RS01850 0.16 +3.4 418,307 + PFLU_RS01850 0.16 +0.8 418,307 + PFLU_RS01850 0.16 +1.0 418,307 + PFLU_RS01850 0.16 -0.4 418,307 + PFLU_RS01850 0.16 -0.4 418,308 - PFLU_RS01850 0.16 -1.0 418,308 - PFLU_RS01850 0.16 +1.4 418,308 - PFLU_RS01850 0.16 +0.8 418,308 - PFLU_RS01850 0.16 -0.3 418,308 - PFLU_RS01850 0.16 +2.4 418,308 - PFLU_RS01850 0.16 +0.4 418,432 + PFLU_RS01850 0.31 +0.3 418,433 - PFLU_RS01850 0.32 +1.5 418,586 + PFLU_RS01850 0.51 -0.3 418,586 + PFLU_RS01850 0.51 -1.7 418,586 + PFLU_RS01850 0.51 -0.8 418,587 - PFLU_RS01850 0.51 -1.4 418,587 - PFLU_RS01850 0.51 +0.2 418,587 - PFLU_RS01850 0.51 +1.4 418,611 - PFLU_RS01850 0.54 -0.1 418,679 + PFLU_RS01850 0.62 -2.0 418,679 + PFLU_RS01850 0.62 -1.2 418,679 + PFLU_RS01850 0.62 +0.9 418,679 + PFLU_RS01850 0.62 +0.6 418,679 + PFLU_RS01850 0.62 +0.5 418,680 - PFLU_RS01850 0.63 +0.5 418,680 - PFLU_RS01850 0.63 +0.6 418,680 - PFLU_RS01850 0.63 +1.7 418,748 + PFLU_RS01850 0.71 +1.1 418,748 + PFLU_RS01850 0.71 +0.6 418,748 + PFLU_RS01850 0.71 -0.2 418,748 + PFLU_RS01850 0.71 +0.3 418,749 - PFLU_RS01850 0.71 +1.0 418,749 - PFLU_RS01850 0.71 +1.5 418,749 - PFLU_RS01850 0.71 +2.4 418,749 - PFLU_RS01850 0.71 -0.5 418,760 + PFLU_RS01850 0.73 +0.2 418,760 + PFLU_RS01850 0.73 +0.5 418,760 + PFLU_RS01850 0.73 -0.4 418,862 + PFLU_RS01850 0.85 +0.0 418,862 + PFLU_RS01850 0.85 +0.3 418,862 + PFLU_RS01850 0.85 -1.4 418,863 - PFLU_RS01850 0.85 +0.4 418,919 + +0.1 418,919 + -1.2 418,919 + -0.1 418,919 + +0.4 418,919 + +1.0 418,919 + +0.7 418,919 + +1.6 418,919 + +1.2 418,919 + -0.1 418,919 + -0.2 418,919 + +0.6 418,920 - +0.3 418,920 - +0.8 418,920 - +1.8 418,920 - +0.5 418,920 - +0.0 418,920 - +1.2
Or see this region's nucleotide sequence