Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13875
Experiment: LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,892,643 | + | BWI76_RS13870 | 0.13 | -0.1 | |
2,892,667 | + | BWI76_RS13870 | 0.16 | +0.0 | |
2,892,734 | + | BWI76_RS13870 | 0.23 | -2.4 | |
2,892,913 | + | BWI76_RS13870 | 0.43 | +0.3 | |
2,893,156 | + | BWI76_RS13870 | 0.69 | +0.1 | |
2,893,192 | - | BWI76_RS13870 | 0.73 | +0.8 | |
2,893,354 | - | -2.6 | |||
2,893,496 | + | +1.2 | |||
2,893,505 | + | -0.9 | |||
2,893,584 | + | +0.6 | |||
2,893,867 | + | BWI76_RS13875 | 0.10 | -0.2 | |
2,894,211 | - | BWI76_RS13875 | 0.25 | +1.0 | |
2,894,583 | + | BWI76_RS13875 | 0.41 | +1.2 | |
2,895,073 | + | BWI76_RS13875 | 0.63 | +1.0 | |
2,895,274 | + | BWI76_RS13875 | 0.71 | +1.1 | |
2,895,397 | + | BWI76_RS13875 | 0.77 | -0.9 | |
2,895,561 | + | BWI76_RS13875 | 0.84 | +0.1 | |
2,895,792 | - | +0.1 | |||
2,896,045 | + | BWI76_RS13880 | 0.11 | +0.4 | |
2,896,468 | - | BWI76_RS13880 | 0.80 | +0.1 | |
2,896,549 | - | +1.4 | |||
2,896,575 | + | +2.5 | |||
2,896,628 | - | +1.1 | |||
2,896,632 | + | +0.0 | |||
2,896,708 | - | +0.1 |
Or see this region's nucleotide sequence