Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12265
Experiment: LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,562,931 | - | BWI76_RS12260 | 0.48 | +0.3 | |
2,563,018 | - | BWI76_RS12260 | 0.55 | +0.4 | |
2,563,113 | - | BWI76_RS12260 | 0.64 | -1.1 | |
2,563,173 | - | BWI76_RS12260 | 0.69 | -0.7 | |
2,563,459 | + | -0.7 | |||
2,563,729 | + | BWI76_RS12265 | 0.14 | -2.1 | |
2,563,737 | - | BWI76_RS12265 | 0.15 | -1.8 | |
2,563,917 | + | BWI76_RS12265 | 0.39 | -1.4 | |
2,563,917 | + | BWI76_RS12265 | 0.39 | -1.5 | |
2,563,917 | + | BWI76_RS12265 | 0.39 | -1.9 | |
2,563,969 | - | BWI76_RS12265 | 0.45 | -3.8 | |
2,564,325 | - | +0.0 | |||
2,564,464 | + | +0.2 | |||
2,564,523 | - | -2.1 | |||
2,564,565 | - | -1.4 | |||
2,564,656 | - | BWI76_RS12270 | 0.16 | -0.2 | |
2,564,889 | + | +2.6 | |||
2,564,902 | + | BWI76_RS12270 | 0.38 | -0.5 | |
2,565,276 | + | BWI76_RS12270 | 0.71 | -4.6 |
Or see this region's nucleotide sequence