Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11945
Experiment: LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,515,148 | + | BWI76_RS11940 | 0.68 | -2.4 | |
2,515,153 | - | BWI76_RS11940 | 0.68 | +0.4 | |
2,515,326 | - | BWI76_RS11940 | 0.74 | -1.1 | |
2,515,761 | + | +0.2 | |||
2,516,688 | - | +1.6 | |||
2,516,753 | - | +0.6 | |||
2,516,942 | + | BWI76_RS11950 | 0.16 | +1.2 | |
2,516,947 | - | BWI76_RS11950 | 0.17 | +1.6 | |
2,517,084 | + | BWI76_RS11950 | 0.34 | +0.5 | |
2,517,098 | - | BWI76_RS11950 | 0.36 | +1.2 | |
2,517,339 | + | BWI76_RS11950 | 0.68 | +1.2 | |
2,517,340 | + | BWI76_RS11950 | 0.68 | -1.3 | |
2,517,345 | + | BWI76_RS11950 | 0.68 | -2.9 | |
2,517,523 | - | -0.7 | |||
2,517,610 | - | -0.5 | |||
2,517,649 | - | +0.9 |
Or see this region's nucleotide sequence