Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11030

Experiment: LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11025 and BWI76_RS11030 are separated by 52 nucleotidesBWI76_RS11030 and BWI76_RS11035 are separated by 109 nucleotides BWI76_RS11025: BWI76_RS11025 - lipid II flippase MurJ, at 2,324,626 to 2,326,161 _RS11025 BWI76_RS11030: BWI76_RS11030 - MFS transporter, at 2,326,214 to 2,327,428 _RS11030 BWI76_RS11035: BWI76_RS11035 - putative LysR-family transcriptional regulator, at 2,327,538 to 2,328,473 _RS11035 Position (kb) 2326 2327 2328Strain fitness (log2 ratio) -3 -2 -1 0 1at 2326.196 kb on - strandat 2326.348 kb on + strand, within BWI76_RS11030at 2326.428 kb on - strand, within BWI76_RS11030at 2326.846 kb on - strand, within BWI76_RS11030at 2327.310 kb on - strandat 2327.590 kb on + strandat 2327.975 kb on - strand, within BWI76_RS11035at 2328.121 kb on + strand, within BWI76_RS11035

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Per-strain Table

Position Strand Gene LocusTag Fraction LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
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2,326,196 - -1.2
2,326,348 + BWI76_RS11030 0.11 -3.2
2,326,428 - BWI76_RS11030 0.18 -2.4
2,326,846 - BWI76_RS11030 0.52 -0.3
2,327,310 - -0.3
2,327,590 + -1.5
2,327,975 - BWI76_RS11035 0.47 +0.8
2,328,121 + BWI76_RS11035 0.62 -0.0

Or see this region's nucleotide sequence