Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06705

Experiment: LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06700 and BWI76_RS06705 are separated by 10 nucleotidesBWI76_RS06705 and BWI76_RS06710 are separated by 4 nucleotides BWI76_RS06700: BWI76_RS06700 - putative maltodextrin transport permease, at 1,405,107 to 1,406,414 _RS06700 BWI76_RS06705: BWI76_RS06705 - binding-protein-dependent transport system inner membrane protein, at 1,406,425 to 1,407,276 _RS06705 BWI76_RS06710: BWI76_RS06710 - glycosyl hydrolase, family 53, at 1,407,281 to 1,408,483 _RS06710 Position (kb) 1406 1407 1408Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1405.461 kb on + strand, within BWI76_RS06700at 1405.461 kb on + strand, within BWI76_RS06700at 1405.461 kb on + strand, within BWI76_RS06700at 1405.469 kb on - strand, within BWI76_RS06700at 1405.534 kb on + strand, within BWI76_RS06700at 1405.689 kb on + strand, within BWI76_RS06700at 1405.942 kb on + strand, within BWI76_RS06700at 1405.975 kb on - strand, within BWI76_RS06700at 1405.995 kb on + strand, within BWI76_RS06700at 1406.138 kb on + strand, within BWI76_RS06700at 1406.144 kb on - strand, within BWI76_RS06700at 1406.531 kb on + strand, within BWI76_RS06705at 1406.560 kb on + strand, within BWI76_RS06705at 1406.619 kb on + strand, within BWI76_RS06705at 1406.825 kb on + strand, within BWI76_RS06705at 1406.881 kb on + strand, within BWI76_RS06705at 1406.929 kb on - strand, within BWI76_RS06705at 1406.973 kb on - strand, within BWI76_RS06705at 1407.115 kb on + strand, within BWI76_RS06705at 1407.529 kb on + strand, within BWI76_RS06710at 1407.529 kb on + strand, within BWI76_RS06710at 1407.593 kb on - strand, within BWI76_RS06710at 1407.638 kb on - strand, within BWI76_RS06710at 1407.748 kb on - strand, within BWI76_RS06710at 1407.836 kb on - strand, within BWI76_RS06710at 1407.898 kb on + strand, within BWI76_RS06710at 1407.898 kb on + strand, within BWI76_RS06710at 1407.898 kb on + strand, within BWI76_RS06710at 1407.898 kb on + strand, within BWI76_RS06710at 1408.023 kb on + strand, within BWI76_RS06710at 1408.058 kb on + strand, within BWI76_RS06710at 1408.063 kb on - strand, within BWI76_RS06710at 1408.065 kb on + strand, within BWI76_RS06710at 1408.065 kb on - strand, within BWI76_RS06710at 1408.066 kb on - strand, within BWI76_RS06710at 1408.071 kb on + strand, within BWI76_RS06710at 1408.076 kb on + strand, within BWI76_RS06710at 1408.076 kb on + strand, within BWI76_RS06710at 1408.084 kb on - strand, within BWI76_RS06710at 1408.084 kb on - strand, within BWI76_RS06710at 1408.128 kb on + strand, within BWI76_RS06710at 1408.144 kb on + strand, within BWI76_RS06710at 1408.144 kb on + strand, within BWI76_RS06710at 1408.154 kb on + strand, within BWI76_RS06710at 1408.154 kb on + strand, within BWI76_RS06710at 1408.159 kb on + strand, within BWI76_RS06710at 1408.161 kb on + strand, within BWI76_RS06710at 1408.161 kb on + strand, within BWI76_RS06710at 1408.161 kb on + strand, within BWI76_RS06710at 1408.161 kb on + strand, within BWI76_RS06710at 1408.161 kb on + strand, within BWI76_RS06710at 1408.161 kb on + strand, within BWI76_RS06710at 1408.161 kb on + strand, within BWI76_RS06710at 1408.161 kb on + strand, within BWI76_RS06710at 1408.161 kb on + strand, within BWI76_RS06710at 1408.162 kb on - strand, within BWI76_RS06710at 1408.162 kb on - strand, within BWI76_RS06710at 1408.167 kb on - strand, within BWI76_RS06710at 1408.168 kb on - strand, within BWI76_RS06710at 1408.169 kb on - strand, within BWI76_RS06710at 1408.169 kb on - strand, within BWI76_RS06710at 1408.169 kb on - strand, within BWI76_RS06710at 1408.169 kb on - strand, within BWI76_RS06710at 1408.172 kb on - strand, within BWI76_RS06710at 1408.195 kb on - strand, within BWI76_RS06710at 1408.195 kb on - strand, within BWI76_RS06710at 1408.220 kb on + strand, within BWI76_RS06710at 1408.225 kb on + strand, within BWI76_RS06710at 1408.225 kb on + strand, within BWI76_RS06710at 1408.233 kb on - strand, within BWI76_RS06710at 1408.233 kb on - strand, within BWI76_RS06710at 1408.244 kb on - strand, within BWI76_RS06710at 1408.244 kb on - strand, within BWI76_RS06710at 1408.244 kb on - strand, within BWI76_RS06710at 1408.269 kb on + strand, within BWI76_RS06710at 1408.269 kb on + strand, within BWI76_RS06710at 1408.269 kb on + strand, within BWI76_RS06710at 1408.269 kb on + strand, within BWI76_RS06710at 1408.269 kb on + strand, within BWI76_RS06710at 1408.269 kb on + strand, within BWI76_RS06710at 1408.269 kb on + strand, within BWI76_RS06710at 1408.269 kb on + strand, within BWI76_RS06710at 1408.269 kb on + strand, within BWI76_RS06710at 1408.269 kb on + strand, within BWI76_RS06710at 1408.269 kb on + strand, within BWI76_RS06710at 1408.269 kb on + strand, within BWI76_RS06710at 1408.269 kb on + strand, within BWI76_RS06710at 1408.269 kb on + strand, within BWI76_RS06710at 1408.269 kb on + strand, within BWI76_RS06710

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Per-strain Table

Position Strand Gene LocusTag Fraction LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
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1,405,461 + BWI76_RS06700 0.27 -0.3
1,405,461 + BWI76_RS06700 0.27 +0.3
1,405,461 + BWI76_RS06700 0.27 -0.6
1,405,469 - BWI76_RS06700 0.28 -2.2
1,405,534 + BWI76_RS06700 0.33 +0.4
1,405,689 + BWI76_RS06700 0.44 -0.2
1,405,942 + BWI76_RS06700 0.64 +0.8
1,405,975 - BWI76_RS06700 0.66 -0.4
1,405,995 + BWI76_RS06700 0.68 -0.3
1,406,138 + BWI76_RS06700 0.79 +0.1
1,406,144 - BWI76_RS06700 0.79 +0.9
1,406,531 + BWI76_RS06705 0.12 -1.3
1,406,560 + BWI76_RS06705 0.16 -1.0
1,406,619 + BWI76_RS06705 0.23 -0.6
1,406,825 + BWI76_RS06705 0.47 -0.7
1,406,881 + BWI76_RS06705 0.54 -0.4
1,406,929 - BWI76_RS06705 0.59 -1.1
1,406,973 - BWI76_RS06705 0.64 +1.1
1,407,115 + BWI76_RS06705 0.81 -0.5
1,407,529 + BWI76_RS06710 0.21 +0.8
1,407,529 + BWI76_RS06710 0.21 -0.6
1,407,593 - BWI76_RS06710 0.26 +0.5
1,407,638 - BWI76_RS06710 0.30 +0.9
1,407,748 - BWI76_RS06710 0.39 +0.7
1,407,836 - BWI76_RS06710 0.46 +0.2
1,407,898 + BWI76_RS06710 0.51 +0.0
1,407,898 + BWI76_RS06710 0.51 +0.3
1,407,898 + BWI76_RS06710 0.51 +0.1
1,407,898 + BWI76_RS06710 0.51 -1.4
1,408,023 + BWI76_RS06710 0.62 +0.3
1,408,058 + BWI76_RS06710 0.65 +0.1
1,408,063 - BWI76_RS06710 0.65 -2.5
1,408,065 + BWI76_RS06710 0.65 -1.4
1,408,065 - BWI76_RS06710 0.65 -0.2
1,408,066 - BWI76_RS06710 0.65 +0.6
1,408,071 + BWI76_RS06710 0.66 -1.1
1,408,076 + BWI76_RS06710 0.66 +1.0
1,408,076 + BWI76_RS06710 0.66 -2.1
1,408,084 - BWI76_RS06710 0.67 +0.8
1,408,084 - BWI76_RS06710 0.67 -1.7
1,408,128 + BWI76_RS06710 0.70 +0.7
1,408,144 + BWI76_RS06710 0.72 -0.8
1,408,144 + BWI76_RS06710 0.72 -0.4
1,408,154 + BWI76_RS06710 0.73 +0.5
1,408,154 + BWI76_RS06710 0.73 +1.4
1,408,159 + BWI76_RS06710 0.73 -0.2
1,408,161 + BWI76_RS06710 0.73 +2.4
1,408,161 + BWI76_RS06710 0.73 -0.2
1,408,161 + BWI76_RS06710 0.73 -0.5
1,408,161 + BWI76_RS06710 0.73 -1.2
1,408,161 + BWI76_RS06710 0.73 -0.5
1,408,161 + BWI76_RS06710 0.73 +0.8
1,408,161 + BWI76_RS06710 0.73 -2.3
1,408,161 + BWI76_RS06710 0.73 -0.2
1,408,161 + BWI76_RS06710 0.73 -0.8
1,408,162 - BWI76_RS06710 0.73 +1.2
1,408,162 - BWI76_RS06710 0.73 -0.4
1,408,167 - BWI76_RS06710 0.74 -0.6
1,408,168 - BWI76_RS06710 0.74 -0.4
1,408,169 - BWI76_RS06710 0.74 -0.7
1,408,169 - BWI76_RS06710 0.74 -0.1
1,408,169 - BWI76_RS06710 0.74 +1.2
1,408,169 - BWI76_RS06710 0.74 -0.5
1,408,172 - BWI76_RS06710 0.74 +0.3
1,408,195 - BWI76_RS06710 0.76 +1.2
1,408,195 - BWI76_RS06710 0.76 -1.4
1,408,220 + BWI76_RS06710 0.78 +1.4
1,408,225 + BWI76_RS06710 0.78 +0.4
1,408,225 + BWI76_RS06710 0.78 -0.9
1,408,233 - BWI76_RS06710 0.79 -1.9
1,408,233 - BWI76_RS06710 0.79 +0.2
1,408,244 - BWI76_RS06710 0.80 -0.8
1,408,244 - BWI76_RS06710 0.80 +0.9
1,408,244 - BWI76_RS06710 0.80 +0.2
1,408,269 + BWI76_RS06710 0.82 +0.5
1,408,269 + BWI76_RS06710 0.82 -1.8
1,408,269 + BWI76_RS06710 0.82 -0.1
1,408,269 + BWI76_RS06710 0.82 -0.3
1,408,269 + BWI76_RS06710 0.82 -1.1
1,408,269 + BWI76_RS06710 0.82 -3.7
1,408,269 + BWI76_RS06710 0.82 +0.6
1,408,269 + BWI76_RS06710 0.82 -0.1
1,408,269 + BWI76_RS06710 0.82 -0.8
1,408,269 + BWI76_RS06710 0.82 +0.6
1,408,269 + BWI76_RS06710 0.82 +0.2
1,408,269 + BWI76_RS06710 0.82 -0.8
1,408,269 + BWI76_RS06710 0.82 -0.1
1,408,269 + BWI76_RS06710 0.82 -0.5
1,408,269 + BWI76_RS06710 0.82 +2.5

Or see this region's nucleotide sequence