Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16390
Experiment: LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,399,711 | + | BWI76_RS16385 | 0.80 | +1.3 | |
3,400,267 | - | +0.3 | |||
3,400,308 | - | -0.2 | |||
3,400,448 | + | -0.9 | |||
3,400,488 | - | +0.4 | |||
3,400,817 | + | BWI76_RS16390 | 0.25 | +0.3 | |
3,400,817 | + | BWI76_RS16390 | 0.25 | +0.8 | |
3,400,825 | - | BWI76_RS16390 | 0.26 | +0.4 | |
3,401,195 | + | BWI76_RS16390 | 0.51 | +1.2 | |
3,401,301 | + | BWI76_RS16390 | 0.58 | +1.6 | |
3,401,391 | - | BWI76_RS16390 | 0.64 | +0.3 | |
3,402,033 | + | -0.1 | |||
3,402,111 | + | BWI76_RS16395 | 0.10 | +0.7 | |
3,402,119 | - | BWI76_RS16395 | 0.12 | -0.2 | |
3,402,407 | + | BWI76_RS16395 | 0.59 | +0.2 | |
3,402,565 | - | BWI76_RS16395 | 0.85 | +0.6 | |
3,402,727 | + | +1.1 |
Or see this region's nucleotide sequence