Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10670
Experiment: LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,251,766 | - | BWI76_RS10660 | 0.74 | +0.8 | |
2,251,904 | - | BWI76_RS10660 | 0.80 | -1.5 | |
2,251,904 | - | BWI76_RS10660 | 0.80 | +0.2 | |
2,251,948 | + | BWI76_RS10660 | 0.82 | +0.4 | |
2,252,107 | + | BWI76_RS10660 | 0.89 | -0.2 | |
2,252,677 | + | BWI76_RS10665 | 0.83 | -0.8 | |
2,252,682 | + | BWI76_RS10665 | 0.84 | -3.0 | |
2,252,685 | - | BWI76_RS10665 | 0.85 | -0.3 | |
2,252,790 | + | -0.8 | |||
2,252,823 | + | +0.3 | |||
2,252,841 | - | +1.5 | |||
2,252,934 | + | BWI76_RS10670 | 0.17 | -0.1 | |
2,252,934 | + | BWI76_RS10670 | 0.17 | -2.0 | |
2,252,980 | - | BWI76_RS10670 | 0.21 | -0.8 | |
2,253,276 | + | BWI76_RS10670 | 0.49 | -0.1 | |
2,253,676 | + | BWI76_RS10670 | 0.86 | -0.8 | |
2,253,783 | - | -0.5 | |||
2,254,178 | + | -0.1 | |||
2,254,365 | - | +0.2 | |||
2,254,570 | - | BWI76_RS10675 | 0.17 | -0.1 | |
2,254,815 | - | BWI76_RS10675 | 0.27 | -0.1 |
Or see this region's nucleotide sequence