Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10550
Experiment: LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,227,618 | - | BWI76_RS10540 | 0.74 | -0.3 | |
2,227,644 | - | BWI76_RS10540 | 0.77 | -0.6 | |
2,227,667 | - | BWI76_RS10540 | 0.79 | -0.8 | |
2,227,754 | - | BWI76_RS10540 | 0.88 | +0.6 | |
2,227,888 | + | +0.3 | |||
2,227,909 | - | -0.2 | |||
2,228,048 | + | +0.0 | |||
2,228,077 | - | +0.4 | |||
2,228,117 | - | +0.2 | |||
2,228,716 | - | BWI76_RS10550 | 0.17 | -0.9 | |
2,229,024 | + | BWI76_RS10550 | 0.39 | -0.1 | |
2,229,082 | + | BWI76_RS10550 | 0.44 | -1.0 | |
2,229,087 | + | BWI76_RS10550 | 0.44 | -0.8 | |
2,229,203 | + | BWI76_RS10550 | 0.52 | +0.4 | |
2,230,028 | - | BWI76_RS10555 | 0.86 | +1.9 | |
2,230,180 | + | +0.3 | |||
2,230,188 | - | -1.3 |
Or see this region's nucleotide sequence