Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS02845
Experiment: LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
582,216 | + | BWI76_RS02840 | 0.77 | +0.1 | |
582,382 | - | BWI76_RS02840 | 0.88 | -0.4 | |
582,402 | - | BWI76_RS02840 | 0.89 | +1.2 | |
582,433 | - | -1.4 | |||
582,436 | + | -0.1 | |||
582,436 | + | +1.3 | |||
582,436 | + | +0.3 | |||
582,436 | + | -0.4 | |||
582,455 | - | +2.2 | |||
582,455 | - | +0.9 | |||
582,475 | + | -1.6 | |||
582,484 | - | +0.7 | |||
582,487 | + | -1.8 | |||
582,524 | - | +0.6 | |||
582,548 | + | +0.1 | |||
582,573 | + | -0.6 | |||
582,608 | + | +1.2 | |||
582,616 | + | -0.4 | |||
582,676 | + | +0.5 | |||
582,731 | - | +1.1 | |||
582,963 | + | -0.6 | |||
583,801 | + | +0.3 | |||
583,866 | - | +1.2 | |||
583,876 | + | +0.8 | |||
583,886 | - | +0.7 | |||
584,057 | - | BWI76_RS02850 | 0.17 | +0.5 | |
584,202 | - | BWI76_RS02850 | 0.28 | +1.4 | |
584,204 | + | BWI76_RS02850 | 0.28 | +0.3 | |
584,441 | + | BWI76_RS02850 | 0.45 | +1.2 | |
584,449 | - | BWI76_RS02850 | 0.46 | -0.0 | |
584,509 | + | BWI76_RS02850 | 0.50 | -2.0 | |
584,516 | - | BWI76_RS02850 | 0.51 | +0.6 |
Or see this region's nucleotide sequence