Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06030
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
1,264,883 | + | BWI76_RS06025 | 0.32 | +0.7 | |
1,264,920 | + | BWI76_RS06025 | 0.34 | +0.4 | |
1,264,952 | - | BWI76_RS06025 | 0.37 | +0.1 | |
1,265,350 | + | BWI76_RS06025 | 0.65 | -0.7 | |
1,265,492 | + | BWI76_RS06025 | 0.75 | -0.1 | |
1,265,492 | + | BWI76_RS06025 | 0.75 | +0.5 | |
1,265,648 | - | BWI76_RS06025 | 0.86 | +0.7 | |
1,265,727 | - | +0.3 | |||
1,265,774 | + | -1.4 | |||
1,265,929 | - | BWI76_RS06030 | 0.11 | -1.2 | |
1,265,977 | - | BWI76_RS06030 | 0.16 | -3.1 | |
1,266,125 | + | BWI76_RS06030 | 0.32 | -1.0 | |
1,266,148 | - | BWI76_RS06030 | 0.34 | +0.3 | |
1,266,405 | + | BWI76_RS06030 | 0.62 | -0.7 | |
1,266,410 | + | BWI76_RS06030 | 0.62 | -0.2 | |
1,266,410 | + | BWI76_RS06030 | 0.62 | -3.0 | |
1,266,410 | + | BWI76_RS06030 | 0.62 | -0.4 | |
1,266,418 | - | BWI76_RS06030 | 0.63 | -1.3 | |
1,266,418 | - | BWI76_RS06030 | 0.63 | -0.9 | |
1,266,764 | - | +0.0 | |||
1,266,764 | - | -0.4 | |||
1,266,786 | + | +0.1 | |||
1,266,804 | - | +0.6 | |||
1,266,831 | - | +0.9 | |||
1,267,007 | - | BWI76_RS06035 | 0.15 | -0.6 | |
1,267,073 | - | BWI76_RS06035 | 0.21 | -0.4 | |
1,267,399 | + | BWI76_RS06035 | 0.52 | +0.9 | |
1,267,506 | - | BWI76_RS06035 | 0.62 | -0.0 |
Or see this region's nucleotide sequence