Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00085
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
16,009 | + | BWI76_RS00080 | 0.35 | -2.9 | |
16,225 | + | BWI76_RS00080 | 0.59 | +0.0 | |
16,451 | + | BWI76_RS00080 | 0.85 | -1.5 | |
16,461 | + | BWI76_RS00080 | 0.86 | -0.6 | |
16,469 | - | BWI76_RS00080 | 0.87 | -0.6 | |
16,514 | - | +1.0 | |||
16,529 | - | -1.3 | |||
16,601 | - | -1.2 | |||
16,609 | + | +0.3 | |||
16,616 | + | -0.8 | |||
16,631 | + | BWI76_RS00085 | 0.11 | -0.0 | |
16,631 | + | BWI76_RS00085 | 0.11 | +0.8 | |
16,932 | - | BWI76_RS00085 | 0.76 | +0.2 | |
17,020 | - | +0.5 | |||
17,088 | - | +0.0 | |||
17,176 | + | -1.8 | |||
17,176 | + | +0.5 | |||
17,176 | + | +0.0 | |||
17,176 | + | +1.0 | |||
17,184 | - | +0.9 | |||
17,184 | - | +0.3 | |||
17,214 | - | -1.2 | |||
17,244 | + | +0.7 | |||
17,252 | - | -1.3 | |||
17,252 | - | -0.4 | |||
17,498 | - | BWI76_RS00090 | 0.24 | -2.1 | |
17,539 | + | BWI76_RS00090 | 0.28 | +0.2 | |
17,546 | + | BWI76_RS00090 | 0.28 | +1.8 | |
17,672 | + | BWI76_RS00090 | 0.39 | -0.0 | |
17,683 | + | BWI76_RS00090 | 0.40 | -0.1 | |
17,688 | + | BWI76_RS00090 | 0.40 | -0.4 | |
17,696 | - | BWI76_RS00090 | 0.41 | -0.6 | |
17,881 | - | BWI76_RS00090 | 0.57 | +0.5 | |
17,963 | + | BWI76_RS00090 | 0.64 | +0.1 | |
18,025 | - | BWI76_RS00090 | 0.69 | -0.1 |
Or see this region's nucleotide sequence