Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21940
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 4,582,771 | - | BWI76_RS21935 | 0.39 | +0.7 | |
| 4,582,831 | + | BWI76_RS21935 | 0.44 | +0.8 | |
| 4,582,831 | + | BWI76_RS21935 | 0.44 | +0.5 | |
| 4,582,986 | - | BWI76_RS21935 | 0.57 | +0.5 | |
| 4,583,084 | + | BWI76_RS21935 | 0.65 | -0.6 | |
| 4,583,227 | + | BWI76_RS21935 | 0.77 | +0.0 | |
| 4,583,323 | - | BWI76_RS21935 | 0.85 | -0.1 | |
| 4,583,323 | - | BWI76_RS21935 | 0.85 | +0.5 | |
| 4,583,652 | + | +0.3 | |||
| 4,583,857 | - | BWI76_RS21940 | 0.37 | -0.5 | |
| 4,583,974 | - | BWI76_RS21940 | 0.52 | -0.9 | |
| 4,584,116 | - | BWI76_RS21940 | 0.71 | -1.7 | |
| 4,584,350 | + | -0.3 | |||
| 4,584,376 | + | -1.7 | |||
| 4,584,386 | + | -1.4 | |||
| 4,584,389 | - | +0.5 | |||
| 4,584,394 | - | +0.1 | |||
| 4,584,394 | - | +0.2 | |||
| 4,584,614 | + | BWI76_RS21945 | 0.14 | -0.3 | |
| 4,584,730 | + | +0.9 | |||
| 4,584,738 | - | BWI76_RS21945 | 0.27 | +1.0 | |
| 4,585,201 | - | BWI76_RS21945 | 0.77 | +0.6 | |
| 4,585,327 | + | -1.1 |
Or see this region's nucleotide sequence