Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18780
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,891,253 | + | BWI76_RS18775 | 0.63 | +0.1 | |
3,891,441 | + | BWI76_RS18775 | 0.76 | -1.1 | |
3,891,449 | - | BWI76_RS18775 | 0.77 | -0.8 | |
3,891,553 | - | BWI76_RS18775 | 0.84 | +0.4 | |
3,891,782 | - | +0.5 | |||
3,891,845 | - | -0.1 | |||
3,891,850 | - | -3.8 | |||
3,892,470 | - | BWI76_RS18780 | 0.46 | -3.9 | |
3,892,495 | - | BWI76_RS18780 | 0.48 | -1.3 | |
3,892,736 | + | BWI76_RS18780 | 0.69 | -1.4 | |
3,893,201 | + | -0.2 | |||
3,893,209 | - | +0.5 | |||
3,893,282 | + | +0.3 | |||
3,893,466 | + | BWI76_RS18785 | 0.13 | -0.4 | |
3,893,730 | + | BWI76_RS18785 | 0.31 | -2.2 | |
3,894,055 | + | BWI76_RS18785 | 0.54 | -0.3 | |
3,894,063 | - | BWI76_RS18785 | 0.55 | +0.5 |
Or see this region's nucleotide sequence