Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17860
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,713,394 | + | BWI76_RS17855 | 0.65 | +0.5 | |
3,713,514 | + | BWI76_RS17855 | 0.71 | -0.0 | |
3,713,580 | + | BWI76_RS17855 | 0.74 | +0.8 | |
3,713,800 | + | BWI76_RS17855 | 0.85 | -1.5 | |
3,714,075 | + | -0.0 | |||
3,714,094 | - | -0.8 | |||
3,714,194 | - | BWI76_RS17860 | 0.49 | -1.4 | |
3,714,261 | - | +1.3 | |||
3,714,368 | - | -1.6 | |||
3,714,368 | - | +0.6 | |||
3,714,445 | + | -0.4 | |||
3,714,452 | + | +0.8 | |||
3,714,618 | + | BWI76_RS17865 | 0.18 | +0.8 | |
3,714,642 | - | BWI76_RS17865 | 0.20 | -1.2 | |
3,714,906 | - | BWI76_RS17865 | 0.39 | -0.9 | |
3,714,927 | + | BWI76_RS17865 | 0.41 | -0.3 | |
3,714,965 | + | BWI76_RS17865 | 0.44 | +0.7 | |
3,714,974 | - | BWI76_RS17865 | 0.44 | +0.4 | |
3,714,975 | + | BWI76_RS17865 | 0.44 | -1.3 | |
3,715,131 | - | BWI76_RS17865 | 0.56 | +0.1 | |
3,715,175 | + | BWI76_RS17865 | 0.59 | +1.0 | |
3,715,221 | - | BWI76_RS17865 | 0.62 | +1.6 | |
3,715,221 | - | BWI76_RS17865 | 0.62 | -1.0 |
Or see this region's nucleotide sequence