Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17510
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 3,630,207 | - | BWI76_RS17505 | 0.26 | +0.6 | |
| 3,630,556 | - | BWI76_RS17505 | 0.55 | -0.9 | |
| 3,630,686 | + | BWI76_RS17505 | 0.66 | +0.8 | |
| 3,630,694 | + | BWI76_RS17505 | 0.66 | +0.3 | |
| 3,630,739 | - | BWI76_RS17505 | 0.70 | -0.0 | |
| 3,630,775 | - | BWI76_RS17505 | 0.73 | +0.8 | |
| 3,630,894 | - | BWI76_RS17505 | 0.83 | +0.3 | |
| 3,630,894 | - | BWI76_RS17505 | 0.83 | +0.7 | |
| 3,631,040 | - | -0.6 | |||
| 3,631,042 | + | +1.0 | |||
| 3,631,146 | - | +0.3 | |||
| 3,631,498 | + | BWI76_RS17510 | 0.28 | +1.4 | |
| 3,631,631 | + | BWI76_RS17510 | 0.39 | +1.9 | |
| 3,632,060 | + | BWI76_RS17510 | 0.74 | -0.3 | |
| 3,632,070 | + | BWI76_RS17510 | 0.75 | +0.1 | |
| 3,632,070 | + | BWI76_RS17510 | 0.75 | +0.2 | |
| 3,632,078 | - | BWI76_RS17510 | 0.76 | +0.6 | |
| 3,632,182 | + | -1.0 | |||
| 3,632,354 | - | +0.1 | |||
| 3,632,799 | + | BWI76_RS17515 | 0.27 | -0.2 | |
| 3,632,876 | - | BWI76_RS17515 | 0.32 | +0.3 | |
| 3,633,047 | - | BWI76_RS17515 | 0.44 | -1.0 | |
| 3,633,173 | - | +1.0 | |||
| 3,633,284 | + | BWI76_RS17515 | 0.61 | -0.1 | |
| 3,633,354 | + | BWI76_RS17515 | 0.66 | +0.1 |
Or see this region's nucleotide sequence