Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14845
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,108,425 | + | +0.4 | |||
3,108,594 | - | +0.5 | |||
3,108,726 | - | BWI76_RS14840 | 0.19 | +0.1 | |
3,108,847 | - | BWI76_RS14840 | 0.39 | +0.6 | |
3,109,135 | + | BWI76_RS14840 | 0.87 | +0.4 | |
3,109,175 | - | +0.3 | |||
3,109,240 | + | +0.2 | |||
3,109,361 | - | +0.7 | |||
3,109,674 | - | BWI76_RS14845 | 0.40 | +2.3 | |
3,109,679 | - | BWI76_RS14845 | 0.41 | +0.4 | |
3,109,803 | - | BWI76_RS14845 | 0.61 | -0.2 | |
3,110,173 | - | -0.7 | |||
3,110,219 | + | -0.2 | |||
3,110,219 | + | -0.0 | |||
3,110,219 | + | -0.0 | |||
3,110,826 | - | BWI76_RS14850 | 0.40 | -0.0 | |
3,110,991 | - | BWI76_RS14850 | 0.56 | -0.6 | |
3,111,013 | - | BWI76_RS14850 | 0.58 | -0.5 |
Or see this region's nucleotide sequence