Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10285
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,176,990 | + | BWI76_RS10275 | 0.89 | +0.3 | |
2,177,183 | + | BWI76_RS10280 | 0.15 | +0.5 | |
2,177,191 | - | BWI76_RS10280 | 0.17 | +0.4 | |
2,177,663 | + | BWI76_RS10280 | 0.82 | -0.4 | |
2,177,696 | + | BWI76_RS10280 | 0.86 | -0.1 | |
2,177,701 | + | BWI76_RS10280 | 0.87 | -0.5 | |
2,177,706 | + | BWI76_RS10280 | 0.87 | +0.5 | |
2,177,793 | + | +0.2 | |||
2,177,981 | - | BWI76_RS10285 | 0.19 | -3.7 | |
2,178,350 | - | BWI76_RS10285 | 0.65 | +0.4 | |
2,178,471 | + | BWI76_RS10285 | 0.79 | -0.4 | |
2,178,488 | - | BWI76_RS10285 | 0.82 | -2.4 | |
2,178,842 | - | +0.5 | |||
2,179,198 | + | BWI76_RS10290 | 0.41 | -0.8 | |
2,179,198 | + | BWI76_RS10290 | 0.41 | +1.6 | |
2,179,206 | - | BWI76_RS10290 | 0.42 | -0.0 | |
2,179,206 | - | BWI76_RS10290 | 0.42 | -0.4 | |
2,179,255 | + | BWI76_RS10290 | 0.47 | +0.4 | |
2,179,499 | + | BWI76_RS10290 | 0.75 | +1.1 | |
2,179,507 | - | +2.0 | |||
2,179,520 | + | -0.9 | |||
2,179,622 | + | BWI76_RS10290 | 0.88 | +0.7 |
Or see this region's nucleotide sequence