Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00560

Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
112,188	+		BWI76_RS00545	0.73	+0.1
112,191	-		BWI76_RS00545	0.74	-1.8
112,209	-		BWI76_RS00545	0.76	-0.1
112,229	-		BWI76_RS00545	0.78	+0.4
112,229	-		BWI76_RS00545	0.78	+1.2
112,241	-		BWI76_RS00545	0.80	-0.1
112,245	+		BWI76_RS00545	0.80	-0.2
112,253	-		BWI76_RS00545	0.81	+0.0
112,253	-		BWI76_RS00545	0.81	+0.2
112,256	+		BWI76_RS00545	0.81	-0.7
112,270	-		BWI76_RS00545	0.83	+1.0
112,274	+		BWI76_RS00545	0.84	-1.1
112,296	-		BWI76_RS00545	0.86	+0.3
112,296	-		BWI76_RS00545	0.86	+1.1
112,296	-		BWI76_RS00545	0.86	+0.0
112,302	+		BWI76_RS00545	0.87	-0.6
112,306	-		BWI76_RS00545	0.87	-0.2
112,306	-		BWI76_RS00545	0.87	-0.5
112,326	+		BWI76_RS00545	0.90	+2.6
112,326	+				+0.0
112,326	+		BWI76_RS00545	0.90	+0.1
112,326	+		BWI76_RS00545	0.90	-2.2
112,326	+		BWI76_RS00545	0.90	-0.6
112,326	+		BWI76_RS00545	0.90	-0.2
112,334	-				+1.4
112,334	-				+0.2
112,334	-				+0.8
112,375	+				-0.6
112,383	-				+0.5
112,383	-				-0.0
112,383	-				-1.3
112,403	+				-0.4
112,427	-				+1.0
112,442	-				-3.1
112,442	-				-3.3
112,444	+				+0.5
112,444	+				-0.3
112,444	+				+0.1
112,444	+				-1.0
112,447	+				-1.1
112,447	-				-0.9
112,449	+				-0.6
112,452	+				+0.6
112,455	-				-0.7
112,457	-				+0.5
112,459	+				+0.4
112,460	-				-0.6
112,471	+				+1.6
112,471	+				+0.4
112,471	+				+0.3
112,479	-				-1.6
112,479	-				+0.4
112,481	+				-0.2
112,512	-		BWI76_RS00550	0.16	-1.7
112,514	+		BWI76_RS00550	0.17	-0.0
112,519	+		BWI76_RS00550	0.19	+0.3
112,519	+		BWI76_RS00550	0.19	+0.4
112,522	-		BWI76_RS00550	0.20	+0.4
112,524	+		BWI76_RS00550	0.20	+0.1
112,532	-		BWI76_RS00550	0.23	-2.0
112,534	+		BWI76_RS00550	0.24	-1.6
112,536	+		BWI76_RS00550	0.25	+0.2
112,536	+		BWI76_RS00550	0.25	+1.3
112,536	+		BWI76_RS00550	0.25	-0.5
112,536	+		BWI76_RS00550	0.25	-1.1
112,536	+		BWI76_RS00550	0.25	-0.7
112,536	+		BWI76_RS00550	0.25	+0.4
112,544	-		BWI76_RS00550	0.28	-0.2
112,546	-		BWI76_RS00550	0.29	+0.5
112,563	+		BWI76_RS00550	0.35	-3.0
112,574	+		BWI76_RS00550	0.39	+0.0
112,577	+		BWI76_RS00550	0.40	-2.1
112,577	+		BWI76_RS00550	0.40	+0.9
112,582	+		BWI76_RS00550	0.42	+0.1
112,590	-		BWI76_RS00550	0.45	+0.1
112,590	-		BWI76_RS00550	0.45	-1.0
112,590	-		BWI76_RS00550	0.45	+1.7
112,613	+		BWI76_RS00550	0.53	+0.5
112,614	+		BWI76_RS00550	0.54	-0.7
112,614	+		BWI76_RS00550	0.54	+0.5
112,614	+		BWI76_RS00550	0.54	+0.7
112,622	-		BWI76_RS00550	0.57	+0.1
112,622	-		BWI76_RS00550	0.57	+2.2
112,627	+		BWI76_RS00550	0.59	+0.6
112,632	+		BWI76_RS00550	0.60	+1.0
112,632	+		BWI76_RS00550	0.60	+0.7
112,632	+		BWI76_RS00550	0.60	-1.3
112,635	-		BWI76_RS00550	0.61	-0.9
112,635	-		BWI76_RS00550	0.61	-0.0
112,635	-		BWI76_RS00550	0.61	+0.0
112,652	+		BWI76_RS00550	0.68	+0.3
112,657	+		BWI76_RS00550	0.70	-1.0
112,675	+		BWI76_RS00550	0.76	+0.5
112,675	+		BWI76_RS00550	0.76	+2.3
112,675	+				+1.0
112,677	+		BWI76_RS00550	0.77	-0.3
112,677	+		BWI76_RS00550	0.77	+0.3
112,690	+		BWI76_RS00550	0.82	+0.4
112,690	+		BWI76_RS00550	0.82	+0.2
112,698	+		BWI76_RS00550	0.85	+0.6
112,698	+		BWI76_RS00550	0.85	-1.4
112,706	+		BWI76_RS00550	0.88	-1.0
112,706	-		BWI76_RS00550	0.88	+1.0
112,768	+				+0.1
112,768	+				+0.1
112,768	+				+1.0
112,768	+				+0.2
112,768	+				+0.2
112,772	-				-1.2
112,776	-				+0.4
112,779	+				-0.3
112,794	+		BWI76_RS00555	0.11	+0.8
112,799	+		BWI76_RS00555	0.12	+0.4
112,802	-		BWI76_RS00555	0.12	+0.3
112,802	-		BWI76_RS00555	0.12	-1.5
112,802	-		BWI76_RS00555	0.12	+0.4
112,802	-		BWI76_RS00555	0.12	+0.3
112,810	-				+0.0
112,810	-		BWI76_RS00555	0.14	-0.1
112,810	-		BWI76_RS00555	0.14	-1.4
112,820	-		BWI76_RS00555	0.16	-1.7
112,856	+		BWI76_RS00555	0.25	-1.0
112,864	-		BWI76_RS00555	0.26	+0.9
112,864	-		BWI76_RS00555	0.26	-1.1
112,906	-		BWI76_RS00555	0.36	-0.3
112,906	-		BWI76_RS00555	0.36	+0.2
112,956	+		BWI76_RS00555	0.47	+1.8
112,983	+		BWI76_RS00555	0.54	-1.3
112,983	+		BWI76_RS00555	0.54	+1.0
112,983	+		BWI76_RS00555	0.54	+1.0
112,990	-		BWI76_RS00555	0.55	-0.6
112,991	-		BWI76_RS00555	0.55	+0.0
112,991	-		BWI76_RS00555	0.55	+0.0
112,991	-		BWI76_RS00555	0.55	-2.2
112,991	-		BWI76_RS00555	0.55	-2.4
112,991	-		BWI76_RS00555	0.55	+1.3
112,991	-		BWI76_RS00555	0.55	-3.2
112,991	-		BWI76_RS00555	0.55	-0.6
113,073	-		BWI76_RS00555	0.74	-0.2
113,073	-		BWI76_RS00555	0.74	-1.8
113,079	+		BWI76_RS00555	0.76	+0.9
113,110	-		BWI76_RS00555	0.83	-0.5
113,157	+				+0.1
113,157	+				-1.3
113,165	-				+0.3
113,165	-				-0.6
113,168	-				-0.3
113,179	+				+0.4
113,179	+				-0.8
113,187	-				-0.6
113,193	+				-0.5
113,309	+		BWI76_RS00560	0.23	+0.9
113,346	+		BWI76_RS00560	0.30	+0.6
113,540	+		BWI76_RS00560	0.65	+0.8
113,590	-		BWI76_RS00560	0.74	+2.2
113,686	+				+0.6
113,702	-				+0.4
113,970	+		BWI76_RS00565	0.44	+0.3
113,970	+		BWI76_RS00565	0.44	-2.2
113,996	+		BWI76_RS00565	0.52	-0.6
114,014	-		BWI76_RS00565	0.58	-0.6
114,032	+		BWI76_RS00565	0.63	+1.2
114,255	+		BWI76_RS00570	0.16	+0.0
114,255	+		BWI76_RS00570	0.16	+0.1
114,448	-		BWI76_RS00570	0.45	-0.0
114,461	+		BWI76_RS00570	0.47	+0.2
114,539	+		BWI76_RS00570	0.59	-0.4
114,547	-		BWI76_RS00570	0.60	-0.2
114,547	-		BWI76_RS00570	0.60	-0.1
114,547	-		BWI76_RS00570	0.60	+0.5
114,646	-		BWI76_RS00570	0.75	+0.4
114,679	-		BWI76_RS00570	0.80	-1.1
114,704	-		BWI76_RS00570	0.84	+0.3
114,718	+		BWI76_RS00570	0.86	+0.6
114,726	-		BWI76_RS00570	0.87	+0.0