Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19790
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 4,137,747 | + | BWI76_RS19785 | 0.22 | -1.0 | |
| 4,137,922 | - | BWI76_RS19785 | 0.38 | +1.1 | |
| 4,137,935 | + | BWI76_RS19785 | 0.39 | -1.3 | |
| 4,138,357 | - | BWI76_RS19785 | 0.78 | -0.7 | |
| 4,138,387 | - | BWI76_RS19785 | 0.81 | +0.9 | |
| 4,138,422 | - | BWI76_RS19785 | 0.84 | -0.4 | |
| 4,138,554 | + | -0.5 | |||
| 4,138,562 | - | +0.1 | |||
| 4,138,837 | - | BWI76_RS19790 | 0.23 | -0.0 | |
| 4,138,964 | - | BWI76_RS19790 | 0.36 | -1.3 | |
| 4,139,086 | + | BWI76_RS19790 | 0.48 | +0.4 | |
| 4,139,115 | + | BWI76_RS19790 | 0.50 | -1.4 | |
| 4,139,181 | + | BWI76_RS19790 | 0.57 | -2.3 | |
| 4,139,189 | - | BWI76_RS19790 | 0.58 | -1.3 | |
| 4,139,393 | + | BWI76_RS19790 | 0.78 | -1.7 | |
| 4,140,272 | - | BWI76_RS19795 | 0.41 | +0.6 | |
| 4,140,272 | - | BWI76_RS19795 | 0.41 | +0.4 | |
| 4,140,381 | - | BWI76_RS19795 | 0.48 | -0.8 | |
| 4,140,381 | - | BWI76_RS19795 | 0.48 | -0.4 | |
| 4,140,409 | + | BWI76_RS19795 | 0.49 | +1.9 | |
| 4,140,577 | - | BWI76_RS19795 | 0.60 | +0.0 |
Or see this region's nucleotide sequence