Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19445
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,061,256 | - | BWI76_RS19440 | 0.13 | +0.4 | |
4,061,405 | - | BWI76_RS19440 | 0.27 | -0.0 | |
4,061,551 | - | BWI76_RS19440 | 0.40 | +1.5 | |
4,061,682 | + | BWI76_RS19440 | 0.52 | +0.4 | |
4,061,860 | + | BWI76_RS19440 | 0.68 | -0.0 | |
4,062,257 | - | -0.4 | |||
4,062,261 | - | +0.3 | |||
4,062,261 | - | -1.2 | |||
4,062,263 | + | -0.5 | |||
4,062,383 | - | +0.1 | |||
4,062,497 | - | BWI76_RS19445 | 0.12 | +0.3 | |
4,062,525 | + | BWI76_RS19445 | 0.14 | +0.9 | |
4,062,582 | + | BWI76_RS19445 | 0.16 | -0.1 | |
4,062,601 | - | BWI76_RS19445 | 0.17 | -0.3 | |
4,062,732 | - | BWI76_RS19445 | 0.23 | +0.2 | |
4,062,999 | + | BWI76_RS19445 | 0.34 | +1.0 | |
4,063,156 | - | BWI76_RS19445 | 0.41 | +0.5 | |
4,063,377 | + | BWI76_RS19445 | 0.51 | +1.7 | |
4,063,553 | + | BWI76_RS19445 | 0.59 | +0.2 | |
4,064,182 | + | BWI76_RS19445 | 0.86 | -0.9 | |
4,064,352 | - | -0.6 | |||
4,064,535 | + | +0.1 | |||
4,064,535 | - | -0.1 | |||
4,064,587 | + | -1.1 | |||
4,064,653 | + | BWI76_RS19450 | 0.14 | -1.9 | |
4,064,725 | + | BWI76_RS19450 | 0.20 | +0.4 | |
4,064,867 | - | BWI76_RS19450 | 0.32 | -0.6 | |
4,065,057 | + | BWI76_RS19450 | 0.49 | -0.1 | |
4,065,162 | + | BWI76_RS19450 | 0.58 | -0.2 |
Or see this region's nucleotide sequence