Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15300
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,204,104 | + | +1.3 | |||
3,204,104 | + | +0.6 | |||
3,204,122 | - | +0.5 | |||
3,204,393 | + | BWI76_RS15290 | 0.36 | -0.8 | |
3,204,632 | + | -1.2 | |||
3,204,875 | - | BWI76_RS15295 | 0.49 | -0.2 | |
3,204,875 | - | BWI76_RS15295 | 0.49 | +0.3 | |
3,204,917 | + | BWI76_RS15295 | 0.60 | -0.8 | |
3,204,918 | + | BWI76_RS15295 | 0.60 | +1.0 | |
3,204,926 | - | BWI76_RS15295 | 0.62 | -3.0 | |
3,205,029 | - | BWI76_RS15295 | 0.89 | -2.6 | |
3,205,150 | - | BWI76_RS15300 | 0.23 | +1.0 | |
3,205,156 | - | BWI76_RS15300 | 0.26 | +0.9 | |
3,205,163 | + | BWI76_RS15300 | 0.29 | +0.9 | |
3,205,171 | - | BWI76_RS15300 | 0.32 | -1.9 | |
3,205,256 | + | BWI76_RS15300 | 0.71 | -1.2 | |
3,205,296 | + | BWI76_RS15300 | 0.89 | +0.8 | |
3,205,560 | - | BWI76_RS15305 | 0.23 | -0.2 | |
3,205,788 | + | BWI76_RS15305 | 0.49 | +0.5 | |
3,206,111 | - | BWI76_RS15305 | 0.85 | -0.5 | |
3,206,314 | + | -0.4 |
Or see this region's nucleotide sequence