Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12480
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,605,111 | - | BWI76_RS12475 | 0.32 | -0.4 | |
2,605,161 | - | BWI76_RS12475 | 0.36 | +0.2 | |
2,605,223 | - | BWI76_RS12475 | 0.40 | +0.1 | |
2,605,375 | + | BWI76_RS12475 | 0.51 | -0.6 | |
2,605,385 | + | BWI76_RS12475 | 0.52 | +0.5 | |
2,605,605 | - | BWI76_RS12475 | 0.67 | +1.2 | |
2,605,670 | + | BWI76_RS12475 | 0.72 | +0.8 | |
2,605,791 | - | BWI76_RS12475 | 0.81 | +0.5 | |
2,605,869 | - | BWI76_RS12475 | 0.86 | -0.4 | |
2,605,934 | - | -1.1 | |||
2,606,225 | - | BWI76_RS12480 | 0.16 | +0.0 | |
2,606,447 | - | BWI76_RS12480 | 0.37 | +1.4 | |
2,606,567 | + | BWI76_RS12480 | 0.48 | -0.0 | |
2,606,585 | - | BWI76_RS12480 | 0.50 | +1.0 | |
2,606,804 | - | BWI76_RS12480 | 0.70 | +3.6 | |
2,606,925 | + | BWI76_RS12480 | 0.82 | +0.8 | |
2,607,146 | + | -1.2 | |||
2,607,149 | - | +0.8 | |||
2,607,351 | - | -0.6 | |||
2,608,100 | - | BWI76_RS12485 | 0.48 | -1.4 |
Or see this region's nucleotide sequence