Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12050
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,531,708 | + | BWI76_RS12040 | 0.14 | -0.1 | |
2,531,983 | + | +0.7 | |||
2,532,114 | - | BWI76_RS12045 | 0.20 | +0.8 | |
2,532,233 | + | BWI76_RS12045 | 0.36 | +0.1 | |
2,532,627 | + | +0.2 | |||
2,532,627 | + | -0.9 | |||
2,532,642 | + | -0.7 | |||
2,532,645 | - | +0.4 | |||
2,532,869 | + | BWI76_RS12050 | 0.53 | -2.4 | |
2,532,877 | - | BWI76_RS12050 | 0.55 | -1.2 | |
2,532,937 | + | BWI76_RS12050 | 0.72 | -1.1 | |
2,532,956 | - | -1.4 | |||
2,532,989 | - | BWI76_RS12050 | 0.86 | -0.5 | |
2,533,106 | - | +0.5 | |||
2,533,276 | + | BWI76_RS12055 | 0.18 | +1.2 | |
2,533,531 | - | BWI76_RS12055 | 0.41 | +1.0 | |
2,533,662 | - | BWI76_RS12055 | 0.53 | -0.4 | |
2,533,933 | + | BWI76_RS12055 | 0.78 | -0.9 |
Or see this region's nucleotide sequence