Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27600

Experiment: D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride
6,139,875	+		PFLU_RS27595	0.39	-0.7
6,139,875	+		PFLU_RS27595	0.39	-1.2
6,139,875	+		PFLU_RS27595	0.39	-2.0
6,139,875	+		PFLU_RS27595	0.39	-2.0
6,139,875	+		PFLU_RS27595	0.39	+0.0
6,139,875	+		PFLU_RS27595	0.39	-0.6
6,139,876	-		PFLU_RS27595	0.39	+2.2
6,139,876	-		PFLU_RS27595	0.39	-1.9
6,139,876	-		PFLU_RS27595	0.39	-2.6
6,139,876	-		PFLU_RS27595	0.39	+1.5
6,139,876	-		PFLU_RS27595	0.39	+1.0
6,139,882	+		PFLU_RS27595	0.40	-1.8
6,139,883	-		PFLU_RS27595	0.40	-2.8
6,139,917	+		PFLU_RS27595	0.43	+0.2
6,139,917	+		PFLU_RS27595	0.43	-0.0
6,139,917	+		PFLU_RS27595	0.43	-1.6
6,139,918	-		PFLU_RS27595	0.43	+1.6
6,139,918	-		PFLU_RS27595	0.43	+1.5
6,139,918	-		PFLU_RS27595	0.43	-1.3
6,139,990	+		PFLU_RS27595	0.48	-2.5
6,139,990	+		PFLU_RS27595	0.48	-1.4
6,139,990	+		PFLU_RS27595	0.48	+0.1
6,139,990	+		PFLU_RS27595	0.48	-2.6
6,139,991	-		PFLU_RS27595	0.48	+1.1
6,139,991	-		PFLU_RS27595	0.48	-0.2
6,139,991	-		PFLU_RS27595	0.48	+2.3
6,139,991	-		PFLU_RS27595	0.48	+1.3
6,139,991	-		PFLU_RS27595	0.48	+1.0
6,139,991	-		PFLU_RS27595	0.48	-0.7
6,139,991	-		PFLU_RS27595	0.48	+1.8
6,139,991	-		PFLU_RS27595	0.48	-1.7
6,139,991	-		PFLU_RS27595	0.48	-1.8
6,140,010	+		PFLU_RS27595	0.50	-2.0
6,140,299	+		PFLU_RS27595	0.73	-1.0
6,140,299	+		PFLU_RS27595	0.73	-0.3
6,140,300	-		PFLU_RS27595	0.73	-2.6
6,140,300	-		PFLU_RS27595	0.73	-1.6
6,140,300	-		PFLU_RS27595	0.73	-0.4
6,140,300	-		PFLU_RS27595	0.73	-3.3
6,140,300	-		PFLU_RS27595	0.73	-2.9
6,140,361	-		PFLU_RS27595	0.78	-0.6
6,140,421	+		PFLU_RS27595	0.82	-1.0
6,140,421	+		PFLU_RS27595	0.82	-2.1
6,140,526	+				+1.2
6,140,526	+				-0.0
6,140,526	+				-2.1
6,140,526	+				+0.6
6,140,527	-				+1.4
6,140,527	-				-2.0
6,140,527	-				-1.6
6,140,527	-				-0.6
6,140,527	-				-2.7
6,140,527	-				-2.3
6,140,527	-				-2.5
6,140,527	-				-2.3
6,140,527	-				-1.7
6,140,527	-				-1.6
6,140,527	-				-2.8
6,140,527	-				-0.9
6,140,630	+				-1.9
6,140,630	+				-0.1
6,140,630	+				+0.9
6,140,631	-				-4.0
6,140,631	-				+1.1
6,140,691	+				-0.4
6,140,691	+				-1.6
6,140,691	+				+1.4
6,140,692	-				+1.8
6,140,692	-				-1.6
6,140,720	+				+1.8
6,140,720	+				-2.2
6,140,720	+				-0.9
6,140,720	+				+0.1
6,140,720	+				+0.4
6,140,721	-				-1.5
6,140,721	-				+0.0
6,140,721	-				+0.6
6,140,721	-				+0.0
6,140,721	-				-0.9
6,140,724	+				+0.8
6,140,724	+				+1.0
6,140,724	+				-1.2
6,140,725	-				+1.0
6,140,725	-				-0.7
6,140,725	-				-2.0
6,140,725	-				-2.1
6,140,725	-				-0.0
6,140,739	+				-0.7
6,140,739	+				-2.0
6,140,739	+				+2.4
6,140,740	-				+1.2
6,140,740	-				-0.7
6,140,740	-				-1.9
6,140,770	+				-1.9
6,140,771	-				+1.9
6,140,783	+				+0.0
6,140,783	+				+0.7
6,140,790	+				+1.6
6,140,795	+				+0.0
6,140,795	+				+0.4
6,140,847	+				-2.3
6,140,847	+				-0.9
6,140,847	+				-2.2
6,140,848	-				-0.5
6,140,848	-				-0.3
6,140,848	-				+1.4
6,140,848	-				-1.3
6,140,848	-				+0.4
6,140,876	+				+0.1
6,140,877	-				-2.3
6,140,891	+				-1.6
6,140,891	+				-1.6
6,140,891	+				-2.0
6,140,891	+				+1.2
6,140,892	-				-0.5
6,140,892	-				-2.0
6,140,892	-				+2.7
6,140,892	-				+0.3
6,140,907	+				+0.3
6,140,907	+				-1.3
6,140,907	+				+1.6
6,140,907	+				+2.1
6,140,907	+				+1.0
6,140,907	+				-3.2
6,140,907	+				-1.3
6,140,907	+				+0.6
6,140,907	+				+0.2
6,140,908	-				-2.5
6,140,908	-				-0.6
6,140,908	-				+0.3
6,140,908	-				-3.3
6,140,908	-				-0.9
6,140,994	+		PFLU_RS27600	0.15	+0.3
6,140,994	+		PFLU_RS27600	0.15	-1.0
6,140,994	+		PFLU_RS27600	0.15	-0.9
6,140,994	+		PFLU_RS27600	0.15	-1.1
6,140,995	-		PFLU_RS27600	0.16	+0.2
6,141,040	+		PFLU_RS27600	0.21	-0.4
6,141,040	+		PFLU_RS27600	0.21	-0.7
6,141,040	+		PFLU_RS27600	0.21	+1.0
6,141,040	+		PFLU_RS27600	0.21	-1.9
6,141,040	+		PFLU_RS27600	0.21	-0.7
6,141,040	+		PFLU_RS27600	0.21	-2.0
6,141,040	+		PFLU_RS27600	0.21	-2.7
6,141,041	-		PFLU_RS27600	0.21	-0.7
6,141,041	-		PFLU_RS27600	0.21	-0.2
6,141,041	-		PFLU_RS27600	0.21	+0.8
6,141,041	-		PFLU_RS27600	0.21	-1.6
6,141,041	-		PFLU_RS27600	0.21	-0.5
6,141,041	-		PFLU_RS27600	0.21	-2.9
6,141,047	+		PFLU_RS27600	0.21	-2.6
6,141,047	+		PFLU_RS27600	0.21	-1.3
6,141,047	+		PFLU_RS27600	0.21	-0.7
6,141,047	+		PFLU_RS27600	0.21	-0.9
6,141,047	+		PFLU_RS27600	0.21	-0.7
6,141,048	-		PFLU_RS27600	0.21	-0.6
6,141,048	-		PFLU_RS27600	0.21	-1.2
6,141,048	-		PFLU_RS27600	0.21	-1.6
6,141,048	-		PFLU_RS27600	0.21	+0.2
6,141,048	-		PFLU_RS27600	0.21	-3.4
6,141,227	+		PFLU_RS27600	0.41	-1.2
6,141,227	+		PFLU_RS27600	0.41	-1.2
6,141,227	+		PFLU_RS27600	0.41	-2.0
6,141,228	-		PFLU_RS27600	0.41	-0.2
6,141,293	+		PFLU_RS27600	0.49	-0.8
6,141,293	+		PFLU_RS27600	0.49	-2.4
6,141,293	+		PFLU_RS27600	0.49	+0.1
6,141,293	+		PFLU_RS27600	0.49	-1.6
6,141,293	+		PFLU_RS27600	0.49	+0.1
6,141,294	-		PFLU_RS27600	0.49	+0.3
6,141,335	+		PFLU_RS27600	0.53	-3.0
6,141,335	+		PFLU_RS27600	0.53	-0.8
6,141,335	+		PFLU_RS27600	0.53	-0.1
6,141,335	+		PFLU_RS27600	0.53	-0.7
6,141,335	+		PFLU_RS27600	0.53	-0.4
6,141,335	+		PFLU_RS27600	0.53	-2.1
6,141,335	+		PFLU_RS27600	0.53	+0.1
6,141,335	+		PFLU_RS27600	0.53	-1.9
6,141,335	+		PFLU_RS27600	0.53	+0.7
6,141,335	+		PFLU_RS27600	0.53	-0.1
6,141,335	+		PFLU_RS27600	0.53	+1.1
6,141,335	+		PFLU_RS27600	0.53	+0.4
6,141,336	-		PFLU_RS27600	0.53	-1.1
6,141,336	-		PFLU_RS27600	0.53	-2.9
6,141,336	-		PFLU_RS27600	0.53	-1.0
6,141,336	-		PFLU_RS27600	0.53	-2.4
6,141,336	-		PFLU_RS27600	0.53	-1.4
6,141,336	-		PFLU_RS27600	0.53	-1.4
6,141,336	-		PFLU_RS27600	0.53	+0.8
6,141,336	-		PFLU_RS27600	0.53	-1.1
6,141,336	-		PFLU_RS27600	0.53	+1.2
6,141,336	-		PFLU_RS27600	0.53	-2.2
6,141,336	-		PFLU_RS27600	0.53	+2.7
6,141,336	-		PFLU_RS27600	0.53	-0.6
6,141,520	+		PFLU_RS27600	0.74	+0.1
6,141,520	+		PFLU_RS27600	0.74	-1.9
6,141,520	+		PFLU_RS27600	0.74	-2.1
6,141,521	-		PFLU_RS27600	0.74	-0.6
6,141,521	-		PFLU_RS27600	0.74	+0.0
6,141,602	-		PFLU_RS27600	0.83	+0.9
6,141,847	+				-1.4
6,141,847	+				+0.9
6,141,847	+				-2.5
6,141,848	-				+1.5
6,141,848	-				-1.0
6,141,848	-				-0.6
6,141,848	-				-1.9
6,141,848	-				-1.9
6,141,848	-				-2.5
6,141,848	-				-1.2
6,141,897	+				-1.5
6,141,897	+				-1.3
6,141,897	+				-0.4
6,141,897	+				-0.4
6,141,897	+				+2.3
6,141,897	+				+0.4
6,141,897	+				-2.4
6,141,897	+				+0.9
6,141,897	+				-3.1
6,141,897	+				-1.1
6,141,897	+				+0.3
6,141,897	+				-2.0
6,141,897	+				+0.7
6,141,898	-				-0.6
6,141,898	-				-0.5
6,141,898	-				+0.0
6,141,898	-				-0.7
6,141,898	-				-0.4
6,141,898	-				+1.9
6,141,898	-				-1.4
6,141,898	-				+1.6
6,141,898	-				+1.1
6,141,898	-				+0.4
6,141,898	-				-2.3
6,141,898	-				-3.3
6,141,936	+				-2.0
6,141,937	-				-1.8
6,141,937	-				-0.2
6,141,937	-				-1.4
6,141,951	+				-0.6
6,141,951	+				-0.9
6,141,951	+				+2.1
6,141,951	+				-3.4
6,141,951	+				-2.5
6,141,951	+				-1.9
6,141,951	+				-0.5
6,141,951	+				+0.6
6,141,951	+				+1.0
6,141,951	+				+2.3
6,141,951	+				-1.3
6,141,952	-				-0.9
6,141,952	-				+2.7
6,141,952	-				-2.2
6,141,952	-				+0.6
6,141,952	-				+0.9
6,141,952	-				-0.2
6,141,952	-				+3.1
6,141,952	-				+1.1
6,141,952	-				+0.8
6,141,952	-				-1.9
6,141,952	-				+0.8
6,141,952	-				-1.4
6,141,963	+				-1.0
6,141,963	+				+1.1
6,141,963	+				-1.6
6,141,963	+				-1.5
6,141,964	-				-0.8
6,141,964	-				+0.5
6,141,982	+				+2.1
6,141,983	-				+0.7
6,142,008	+				+1.8
6,142,008	+				+0.3
6,142,009	-				-0.6
6,142,052	+				-0.6
6,142,052	+				-0.7
6,142,052	+				-0.2
6,142,052	+				+1.6
6,142,052	+				+0.8
6,142,052	+				+2.6
6,142,052	+				+1.0
6,142,052	+				-1.6
6,142,052	+				+0.5
6,142,052	+				-1.5
6,142,052	+				-1.1
6,142,052	+				-2.1
6,142,052	+				-1.6
6,142,053	-				+0.3
6,142,053	-				-0.8
6,142,053	-				-0.5
6,142,053	-				-0.2
6,142,053	-				-2.3
6,142,053	-				-2.0
6,142,053	-				+1.1
6,142,053	-				-2.6
6,142,053	-				-1.7
6,142,053	-				-2.7
6,142,053	-				-2.0
6,142,062	+				+0.0
6,142,063	-				-1.4
6,142,075	+				-1.7
6,142,075	+				-1.6
6,142,076	-				-3.0
6,142,076	-				-0.4
6,142,105	+				-2.0
6,142,105	+				-0.2
6,142,105	+				-0.9
6,142,105	+				-1.5
6,142,105	+				-0.3
6,142,105	+				-1.2
6,142,106	-				+0.7
6,142,106	-				-2.3
6,142,106	-				-2.0
6,142,160	+		PFLU_RS27605	0.10	-2.2
6,142,160	+		PFLU_RS27605	0.10	-1.5
6,142,160	+		PFLU_RS27605	0.10	+2.9
6,142,160	+		PFLU_RS27605	0.10	-2.2
6,142,160	+		PFLU_RS27605	0.10	-1.0
6,142,160	+		PFLU_RS27605	0.10	-1.2
6,142,160	+		PFLU_RS27605	0.10	+1.6
6,142,160	+		PFLU_RS27605	0.10	-1.6
6,142,160	+		PFLU_RS27605	0.10	-3.7
6,142,160	+		PFLU_RS27605	0.10	+0.1
6,142,160	+		PFLU_RS27605	0.10	-1.6
6,142,160	+		PFLU_RS27605	0.10	-0.9
6,142,160	+		PFLU_RS27605	0.10	+1.0
6,142,160	+		PFLU_RS27605	0.10	-0.3
6,142,160	+		PFLU_RS27605	0.10	+1.0
6,142,160	+		PFLU_RS27605	0.10	-1.8
6,142,160	+		PFLU_RS27605	0.10	+0.0
6,142,160	+		PFLU_RS27605	0.10	+1.1
6,142,160	+		PFLU_RS27605	0.10	-2.7
6,142,160	+		PFLU_RS27605	0.10	+0.0
6,142,160	+		PFLU_RS27605	0.10	+0.6
6,142,160	+		PFLU_RS27605	0.10	-2.3
6,142,160	+		PFLU_RS27605	0.10	+1.5
6,142,160	+		PFLU_RS27605	0.10	-0.4
6,142,160	+		PFLU_RS27605	0.10	+0.0
6,142,160	+		PFLU_RS27605	0.10	+0.8
6,142,160	+		PFLU_RS27605	0.10	-0.9
6,142,160	+		PFLU_RS27605	0.10	+1.6
6,142,160	+		PFLU_RS27605	0.10	-3.0
6,142,160	+		PFLU_RS27605	0.10	-1.8
6,142,160	+		PFLU_RS27605	0.10	-1.2
6,142,160	+		PFLU_RS27605	0.10	-0.3
6,142,160	+		PFLU_RS27605	0.10	+0.1
6,142,160	+		PFLU_RS27605	0.10	-2.8
6,142,160	+		PFLU_RS27605	0.10	-0.9
6,142,160	+		PFLU_RS27605	0.10	-2.2
6,142,160	+		PFLU_RS27605	0.10	-0.9
6,142,161	-		PFLU_RS27605	0.10	-2.5
6,142,161	-		PFLU_RS27605	0.10	-3.1
6,142,161	-		PFLU_RS27605	0.10	-0.2
6,142,161	-		PFLU_RS27605	0.10	-1.1
6,142,161	-		PFLU_RS27605	0.10	+0.3
6,142,161	-		PFLU_RS27605	0.10	-0.2
6,142,161	-		PFLU_RS27605	0.10	-2.6
6,142,161	-		PFLU_RS27605	0.10	+0.9
6,142,161	-		PFLU_RS27605	0.10	-2.8
6,142,161	-		PFLU_RS27605	0.10	-1.4
6,142,161	-		PFLU_RS27605	0.10	-1.9
6,142,161	-		PFLU_RS27605	0.10	-1.6
6,142,161	-		PFLU_RS27605	0.10	-3.1
6,142,161	-		PFLU_RS27605	0.10	+0.3
6,142,161	-		PFLU_RS27605	0.10	+1.7
6,142,161	-		PFLU_RS27605	0.10	-1.2
6,142,161	-		PFLU_RS27605	0.10	-1.9
6,142,161	-		PFLU_RS27605	0.10	-0.1
6,142,161	-		PFLU_RS27605	0.10	+0.7
6,142,161	-		PFLU_RS27605	0.10	-1.9
6,142,161	-		PFLU_RS27605	0.10	-1.9
6,142,161	-		PFLU_RS27605	0.10	-1.9
6,142,161	-		PFLU_RS27605	0.10	+0.3
6,142,161	-		PFLU_RS27605	0.10	+1.9
6,142,161	-		PFLU_RS27605	0.10	-0.6
6,142,161	-		PFLU_RS27605	0.10	-2.4
6,142,161	-		PFLU_RS27605	0.10	+1.4
6,142,161	-		PFLU_RS27605	0.10	+1.3
6,142,161	-		PFLU_RS27605	0.10	+1.2
6,142,161	-		PFLU_RS27605	0.10	-1.7
6,142,161	-		PFLU_RS27605	0.10	+0.6
6,142,161	-		PFLU_RS27605	0.10	-1.2
6,142,161	-		PFLU_RS27605	0.10	-0.1
6,142,161	-		PFLU_RS27605	0.10	+0.1
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