Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19115
Experiment: LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 3,972,708 | + | BWI76_RS19110 | 0.55 | +0.4 | |
| 3,973,311 | - | -2.3 | |||
| 3,973,518 | - | +0.3 | |||
| 3,973,571 | - | +2.4 | |||
| 3,973,571 | - | -0.3 | |||
| 3,973,799 | - | -0.7 | |||
| 3,973,992 | + | BWI76_RS19115 | 0.17 | -0.1 | |
| 3,973,997 | + | BWI76_RS19115 | 0.18 | -1.6 | |
| 3,974,041 | + | BWI76_RS19115 | 0.20 | +0.9 | |
| 3,974,049 | - | BWI76_RS19115 | 0.21 | +0.7 | |
| 3,974,084 | - | BWI76_RS19115 | 0.22 | +0.6 | |
| 3,974,572 | - | BWI76_RS19115 | 0.49 | +1.0 | |
| 3,974,696 | + | BWI76_RS19115 | 0.56 | -0.0 | |
| 3,974,715 | + | BWI76_RS19115 | 0.57 | +1.4 | |
| 3,974,717 | + | BWI76_RS19115 | 0.57 | +2.1 | |
| 3,974,988 | - | BWI76_RS19115 | 0.71 | -0.0 | |
| 3,975,669 | + | BWI76_RS19120 | 0.21 | +1.7 |
Or see this region's nucleotide sequence