Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16015

Experiment: LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
3,319,739	-				+0.2
3,319,739	-				-0.2
3,319,745	+				+0.8
3,319,754	+				+0.3
3,319,758	-				-0.3
3,319,762	-				-1.5
3,319,830	+		BWI76_RS16005	0.20	-0.3
3,319,839	+				-0.9
3,319,852	-		BWI76_RS16005	0.26	-0.4
3,319,886	+		BWI76_RS16005	0.36	+0.6
3,319,888	+		BWI76_RS16005	0.36	-0.3
3,319,888	+		BWI76_RS16005	0.36	+1.1
3,319,896	-		BWI76_RS16005	0.38	-0.4
3,319,912	+		BWI76_RS16005	0.43	+0.1
3,319,912	+		BWI76_RS16005	0.43	-2.4
3,319,920	-		BWI76_RS16005	0.45	-0.1
3,319,920	-		BWI76_RS16005	0.45	+1.4
3,319,920	-		BWI76_RS16005	0.45	-0.3
3,319,920	-		BWI76_RS16005	0.45	+0.2
3,319,943	+		BWI76_RS16005	0.51	+0.7
3,319,944	-		BWI76_RS16005	0.52	-0.3
3,319,944	-		BWI76_RS16005	0.52	-1.3
3,319,944	-		BWI76_RS16005	0.52	+0.1
3,319,945	-		BWI76_RS16005	0.52	+0.5
3,319,951	-		BWI76_RS16005	0.53	+0.5
3,319,951	-		BWI76_RS16005	0.53	-4.2
3,319,952	-		BWI76_RS16005	0.54	-0.4
3,319,952	-		BWI76_RS16005	0.54	-1.3
3,320,123	+				-0.8
3,320,131	-				+0.3
3,320,131	-				+0.3
3,320,156	-				-0.7
3,320,214	-		BWI76_RS16010	0.20	+0.5
3,320,223	-		BWI76_RS16010	0.23	-0.0
3,320,223	-		BWI76_RS16010	0.23	-0.8
3,320,227	+		BWI76_RS16010	0.24	+0.4
3,320,229	+		BWI76_RS16010	0.24	+0.6
3,320,242	-		BWI76_RS16010	0.28	-2.8
3,320,245	-		BWI76_RS16010	0.29	-2.3
3,320,258	-		BWI76_RS16010	0.33	+1.0
3,320,283	+		BWI76_RS16010	0.41	-0.3
3,320,285	-		BWI76_RS16010	0.42	+0.7
3,320,301	-		BWI76_RS16010	0.47	-2.2
3,320,405	-		BWI76_RS16010	0.79	-2.4
3,320,411	+		BWI76_RS16010	0.81	-1.7
3,320,419	-		BWI76_RS16010	0.83	-1.9
3,320,425	+		BWI76_RS16010	0.85	+1.4
3,320,432	-		BWI76_RS16010	0.87	+0.1
3,320,460	-				+0.6
3,320,594	+				-1.0
3,320,594	+				+0.7
3,320,594	+				+2.0
3,320,594	+				+0.9
3,320,594	+				-0.5
3,320,595	+				+1.2
3,320,599	+				+1.1
3,320,602	-				+0.3
3,320,602	-				+1.1
3,320,602	-				+0.4
3,320,602	-				+0.5
3,320,602	-				-0.4
3,320,602	-				-0.9
3,320,602	-				+0.0
3,320,603	-				+2.0
3,320,613	-				+1.3
3,320,638	+				+1.6
3,320,648	+				+0.1
3,320,704	+				+1.8
3,320,713	+				+0.7
3,320,728	-				+0.4
3,321,032	-		BWI76_RS16015	0.37	+1.4
3,321,088	+		BWI76_RS16015	0.43	+1.1
3,321,150	+		BWI76_RS16015	0.49	+1.9
3,321,477	+		BWI76_RS16015	0.80	+0.5
3,321,756	-				-1.7
3,321,872	+				-3.0
3,321,891	-				+0.1
3,322,068	+				+0.1
3,322,445	+		BWI76_RS16020	0.20	-0.5
3,322,509	-		BWI76_RS16020	0.24	+1.3
3,322,596	+		BWI76_RS16020	0.29	-0.1
3,322,604	-		BWI76_RS16020	0.29	-2.7