Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14850
Experiment: LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 3,109,674 | - | BWI76_RS14845 | 0.40 | +1.1 | |
| 3,109,679 | - | BWI76_RS14845 | 0.41 | -0.3 | |
| 3,109,803 | - | BWI76_RS14845 | 0.61 | -0.6 | |
| 3,110,173 | - | -0.7 | |||
| 3,110,219 | + | +0.2 | |||
| 3,110,219 | + | -0.6 | |||
| 3,110,219 | + | -1.3 | |||
| 3,110,826 | - | BWI76_RS14850 | 0.40 | -1.5 | |
| 3,110,991 | - | BWI76_RS14850 | 0.56 | +0.1 | |
| 3,111,013 | - | BWI76_RS14850 | 0.58 | -2.3 | |
| 3,111,266 | + | BWI76_RS14850 | 0.82 | -1.0 | |
| 3,111,274 | - | BWI76_RS14850 | 0.83 | +0.1 | |
| 3,111,330 | + | BWI76_RS14850 | 0.89 | -0.0 | |
| 3,111,372 | - | -0.1 | |||
| 3,111,468 | + | -0.9 | |||
| 3,111,567 | + | +0.8 | |||
| 3,111,651 | + | +0.5 | |||
| 3,111,652 | + | +0.4 | |||
| 3,111,660 | - | +0.7 | |||
| 3,111,660 | - | +0.4 | |||
| 3,111,660 | - | +0.4 | |||
| 3,111,660 | - | -0.6 | |||
| 3,111,842 | + | BWI76_RS14855 | 0.15 | +0.6 | |
| 3,111,844 | - | BWI76_RS14855 | 0.15 | -0.4 | |
| 3,111,907 | + | BWI76_RS14855 | 0.21 | +0.0 | |
| 3,111,972 | - | BWI76_RS14855 | 0.28 | +0.3 | |
| 3,112,231 | - | BWI76_RS14855 | 0.55 | +0.4 | |
| 3,112,435 | + | BWI76_RS14855 | 0.77 | +0.4 |
Or see this region's nucleotide sequence