Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06850
Experiment: LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 1,437,121 | + | BWI76_RS06850 | 0.13 | +1.1 | |
| 1,437,245 | - | BWI76_RS06850 | 0.23 | -0.6 | |
| 1,437,277 | + | BWI76_RS06850 | 0.25 | -2.4 | |
| 1,437,352 | - | BWI76_RS06850 | 0.31 | -3.4 | |
| 1,437,401 | + | BWI76_RS06850 | 0.35 | -1.5 | |
| 1,437,625 | - | BWI76_RS06850 | 0.52 | +0.1 | |
| 1,437,837 | + | BWI76_RS06850 | 0.68 | +1.1 | |
| 1,438,390 | + | +0.4 | |||
| 1,438,539 | - | BWI76_RS06855 | 0.15 | -0.4 | |
| 1,438,581 | - | BWI76_RS06855 | 0.17 | -2.7 | |
| 1,438,659 | - | BWI76_RS06855 | 0.22 | +0.1 | |
| 1,438,767 | + | BWI76_RS06855 | 0.28 | -3.3 | |
| 1,438,815 | + | BWI76_RS06855 | 0.31 | +0.0 | |
| 1,438,963 | + | BWI76_RS06855 | 0.40 | +0.4 | |
| 1,438,963 | + | BWI76_RS06855 | 0.40 | +1.6 | |
| 1,438,971 | - | BWI76_RS06855 | 0.40 | +0.3 | |
| 1,438,971 | - | BWI76_RS06855 | 0.40 | -2.4 | |
| 1,438,971 | - | BWI76_RS06855 | 0.40 | -0.7 | |
| 1,439,116 | + | BWI76_RS06855 | 0.49 | -0.4 | |
| 1,439,160 | - | BWI76_RS06855 | 0.52 | +1.5 | |
| 1,439,238 | + | BWI76_RS06855 | 0.56 | +0.9 |
Or see this region's nucleotide sequence