Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24660
Experiment: LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 5,138,211 | - | BWI76_RS24655 | 0.21 | +0.4 | |
| 5,138,512 | - | BWI76_RS24655 | 0.50 | +0.9 | |
| 5,138,512 | - | BWI76_RS24655 | 0.50 | +0.5 | |
| 5,138,593 | - | BWI76_RS24655 | 0.58 | -0.0 | |
| 5,138,593 | - | BWI76_RS24655 | 0.58 | +0.4 | |
| 5,138,634 | - | BWI76_RS24655 | 0.62 | -0.5 | |
| 5,138,662 | - | BWI76_RS24655 | 0.64 | +0.9 | |
| 5,138,771 | + | BWI76_RS24655 | 0.75 | +0.9 | |
| 5,139,264 | - | BWI76_RS24660 | 0.16 | +0.4 | |
| 5,139,284 | - | BWI76_RS24660 | 0.17 | +0.1 | |
| 5,139,517 | + | BWI76_RS24660 | 0.33 | +1.1 | |
| 5,139,583 | - | BWI76_RS24660 | 0.37 | +1.1 | |
| 5,140,343 | + | BWI76_RS24660 | 0.89 | +3.4 | |
| 5,140,415 | - | +0.7 | |||
| 5,140,494 | + | +0.3 | |||
| 5,140,502 | + | +0.9 | |||
| 5,140,506 | + | -0.7 | |||
| 5,140,591 | - | +0.8 | |||
| 5,140,846 | + | BWI76_RS24665 | 0.12 | -0.8 | |
| 5,140,846 | - | BWI76_RS24665 | 0.12 | -1.8 | |
| 5,141,088 | + | BWI76_RS24665 | 0.37 | -0.3 | |
| 5,141,126 | + | BWI76_RS24665 | 0.40 | +0.2 | |
| 5,141,143 | + | BWI76_RS24665 | 0.42 | +0.5 | |
| 5,141,438 | + | BWI76_RS24665 | 0.73 | +0.5 |
Or see this region's nucleotide sequence