Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20885
Experiment: LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,366,189 | - | BWI76_RS20880 | 0.53 | -1.5 | |
4,366,394 | + | BWI76_RS20880 | 0.83 | -0.7 | |
4,366,824 | - | +0.3 | |||
4,366,831 | - | BWI76_RS20885 | 0.12 | +0.1 | |
4,367,071 | + | BWI76_RS20885 | 0.24 | -1.0 | |
4,367,079 | - | BWI76_RS20885 | 0.24 | +1.3 | |
4,367,901 | + | BWI76_RS20885 | 0.65 | -2.1 | |
4,367,909 | - | BWI76_RS20885 | 0.66 | -0.5 | |
4,368,287 | + | BWI76_RS20885 | 0.85 | -0.6 | |
4,368,300 | - | BWI76_RS20885 | 0.85 | -1.4 | |
4,368,430 | + | -1.3 | |||
4,368,438 | - | +0.2 | |||
4,368,450 | - | -2.7 | |||
4,368,470 | + | -0.6 | |||
4,368,487 | - | +0.2 | |||
4,368,632 | - | +0.4 | |||
4,368,632 | - | -0.7 | |||
4,368,806 | + | BWI76_RS20890 | 0.23 | +0.7 | |
4,368,836 | - | BWI76_RS20890 | 0.27 | +0.8 | |
4,368,978 | + | BWI76_RS20890 | 0.43 | -0.9 | |
4,368,986 | - | BWI76_RS20890 | 0.44 | +0.2 | |
4,368,986 | - | BWI76_RS20890 | 0.44 | -1.1 | |
4,369,069 | - | BWI76_RS20890 | 0.53 | +1.3 | |
4,369,071 | - | BWI76_RS20890 | 0.54 | +1.3 |
Or see this region's nucleotide sequence