Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18415
Experiment: LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,820,390 | - | +0.3 | |||
3,820,679 | + | BWI76_RS18410 | 0.30 | -0.8 | |
3,820,848 | + | BWI76_RS18410 | 0.49 | -1.8 | |
3,820,848 | + | BWI76_RS18410 | 0.49 | +0.7 | |
3,820,848 | + | BWI76_RS18410 | 0.49 | -0.1 | |
3,820,848 | + | BWI76_RS18410 | 0.49 | +0.2 | |
3,821,203 | + | BWI76_RS18410 | 0.88 | -1.1 | |
3,821,326 | + | +0.2 | |||
3,821,438 | + | BWI76_RS18415 | 0.30 | -1.9 | |
3,821,517 | + | BWI76_RS18415 | 0.46 | -0.6 | |
3,821,895 | + | +0.3 | |||
3,822,162 | + | BWI76_RS18420 | 0.27 | +0.1 | |
3,822,213 | - | BWI76_RS18420 | 0.30 | +1.0 | |
3,822,238 | + | BWI76_RS18420 | 0.32 | +2.8 | |
3,822,273 | + | BWI76_RS18420 | 0.34 | +0.5 | |
3,822,299 | + | BWI76_RS18420 | 0.36 | -0.8 | |
3,822,317 | + | BWI76_RS18420 | 0.37 | +0.6 | |
3,822,344 | + | BWI76_RS18420 | 0.39 | +0.2 | |
3,822,431 | + | BWI76_RS18420 | 0.45 | +0.2 | |
3,822,439 | - | BWI76_RS18420 | 0.46 | +0.2 | |
3,822,713 | - | BWI76_RS18420 | 0.64 | +0.7 |
Or see this region's nucleotide sequence