Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11640
Experiment: LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 2,447,864 | - | BWI76_RS11630 | 0.79 | +0.2 | |
| 2,447,902 | - | BWI76_RS11630 | 0.82 | +0.2 | |
| 2,448,372 | - | BWI76_RS11635 | 0.24 | +1.0 | |
| 2,448,574 | + | BWI76_RS11635 | 0.56 | -1.0 | |
| 2,448,798 | + | -1.2 | |||
| 2,448,862 | - | +0.7 | |||
| 2,448,929 | - | +0.9 | |||
| 2,448,964 | - | +0.9 | |||
| 2,449,006 | - | BWI76_RS11640 | 0.10 | +1.3 | |
| 2,449,235 | - | BWI76_RS11640 | 0.25 | -0.7 | |
| 2,449,978 | + | BWI76_RS11640 | 0.73 | +1.0 | |
| 2,449,986 | - | BWI76_RS11640 | 0.74 | +1.3 | |
| 2,450,218 | - | BWI76_RS11640 | 0.89 | -0.1 | |
| 2,450,364 | - | +0.1 | |||
| 2,450,459 | - | +1.3 | |||
| 2,450,526 | - | BWI76_RS11645 | 0.14 | +0.9 | |
| 2,450,721 | + | BWI76_RS11645 | 0.31 | -0.2 | |
| 2,450,729 | + | BWI76_RS11645 | 0.32 | +0.5 |
Or see this region's nucleotide sequence