Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11235
Experiment: LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,369,610 | + | -0.3 | |||
2,369,628 | + | +0.8 | |||
2,369,636 | - | -0.5 | |||
2,369,735 | + | +0.8 | |||
2,369,988 | - | BWI76_RS11230 | 0.36 | +0.8 | |
2,370,211 | - | BWI76_RS11230 | 0.63 | +0.1 | |
2,370,335 | - | BWI76_RS11230 | 0.77 | -0.0 | |
2,370,442 | + | +0.4 | |||
2,370,552 | + | -0.3 | |||
2,370,560 | - | -0.4 | |||
2,370,623 | + | BWI76_RS11235 | 0.22 | -1.6 | |
2,370,904 | + | +0.4 | |||
2,371,030 | + | +0.1 | |||
2,371,166 | - | -1.8 | |||
2,371,571 | + | BWI76_RS11240 | 0.35 | -1.6 | |
2,371,715 | + | BWI76_RS11240 | 0.49 | +1.3 | |
2,371,725 | + | BWI76_RS11240 | 0.49 | +0.1 | |
2,371,762 | - | BWI76_RS11240 | 0.53 | -0.0 |
Or see this region's nucleotide sequence