Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06785
Experiment: LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 1,422,692 | - | BWI76_RS06780 | 0.57 | -1.5 | |
| 1,422,782 | - | BWI76_RS06780 | 0.64 | +3.4 | |
| 1,422,802 | + | BWI76_RS06780 | 0.66 | +0.2 | |
| 1,422,810 | - | BWI76_RS06780 | 0.67 | -1.7 | |
| 1,422,831 | - | BWI76_RS06780 | 0.69 | -1.4 | |
| 1,422,985 | + | BWI76_RS06780 | 0.81 | +0.3 | |
| 1,423,032 | + | BWI76_RS06780 | 0.85 | -4.1 | |
| 1,423,034 | - | BWI76_RS06780 | 0.86 | -1.1 | |
| 1,423,140 | - | +0.1 | |||
| 1,423,142 | + | +0.3 | |||
| 1,423,161 | + | -1.1 | |||
| 1,423,430 | + | BWI76_RS06785 | 0.13 | +0.8 | |
| 1,423,562 | - | BWI76_RS06785 | 0.33 | +0.5 | |
| 1,423,660 | + | BWI76_RS06785 | 0.48 | -1.8 | |
| 1,423,786 | - | BWI76_RS06785 | 0.67 | +1.6 | |
| 1,423,786 | - | BWI76_RS06785 | 0.67 | -3.1 | |
| 1,423,906 | - | BWI76_RS06785 | 0.86 | +2.2 | |
| 1,423,906 | - | BWI76_RS06785 | 0.86 | +2.4 | |
| 1,423,916 | - | BWI76_RS06785 | 0.87 | +0.6 | |
| 1,423,916 | - | BWI76_RS06785 | 0.87 | +0.9 | |
| 1,423,976 | + | -0.9 | |||
| 1,424,132 | - | +0.7 | |||
| 1,424,132 | - | +1.0 | |||
| 1,424,626 | + | BWI76_RS06790 | 0.15 | -2.2 | |
| 1,424,780 | - | BWI76_RS06790 | 0.19 | +0.4 | |
| 1,424,792 | - | BWI76_RS06790 | 0.20 | +0.3 | |
| 1,424,951 | + | BWI76_RS06790 | 0.25 | +0.5 |
Or see this region's nucleotide sequence