Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS04840
Experiment: LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 1,010,591 | + | BWI76_RS04835 | 0.42 | -0.0 | |
| 1,010,797 | - | BWI76_RS04835 | 0.57 | +0.5 | |
| 1,010,836 | - | BWI76_RS04835 | 0.60 | +0.1 | |
| 1,011,154 | + | BWI76_RS04835 | 0.83 | -0.6 | |
| 1,011,270 | + | -0.2 | |||
| 1,011,506 | - | BWI76_RS04840 | 0.24 | +0.3 | |
| 1,011,553 | + | BWI76_RS04840 | 0.35 | +0.6 | |
| 1,011,670 | + | BWI76_RS04840 | 0.62 | +2.3 | |
| 1,011,698 | + | BWI76_RS04840 | 0.69 | +0.8 | |
| 1,011,706 | - | BWI76_RS04840 | 0.71 | -1.2 | |
| 1,011,808 | + | +0.2 | |||
| 1,011,808 | + | -1.2 | |||
| 1,012,036 | + | +0.0 | |||
| 1,012,100 | - | +0.2 | |||
| 1,012,194 | - | BWI76_RS04845 | 0.20 | +0.1 | |
| 1,012,418 | + | BWI76_RS04845 | 0.45 | -0.7 | |
| 1,012,426 | - | BWI76_RS04845 | 0.46 | +0.1 | |
| 1,012,802 | + | BWI76_RS04845 | 0.88 | -0.4 | |
| 1,012,802 | + | BWI76_RS04845 | 0.88 | -0.1 | |
| 1,012,810 | - | BWI76_RS04845 | 0.89 | -1.0 |
Or see this region's nucleotide sequence