Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22790

Experiment: LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS22785 and BWI76_RS22790 are separated by 67 nucleotidesBWI76_RS22790 and BWI76_RS22795 are separated by 80 nucleotides BWI76_RS22785: BWI76_RS22785 - NAD(P)H-binding protein, at 4,749,479 to 4,750,588 _RS22785 BWI76_RS22790: BWI76_RS22790 - phosphopyruvate hydratase, at 4,750,656 to 4,751,954 _RS22790 BWI76_RS22795: BWI76_RS22795 - CTP synthetase, at 4,752,035 to 4,753,672 _RS22795 Position (kb) 4750 4751 4752Strain fitness (log2 ratio) -1 0 1 2 3 4at 4749.662 kb on + strand, within BWI76_RS22785at 4749.662 kb on + strand, within BWI76_RS22785at 4749.664 kb on + strand, within BWI76_RS22785at 4749.675 kb on + strand, within BWI76_RS22785at 4749.679 kb on - strand, within BWI76_RS22785at 4749.681 kb on - strand, within BWI76_RS22785at 4749.686 kb on - strand, within BWI76_RS22785at 4749.691 kb on - strand, within BWI76_RS22785at 4749.752 kb on - strand, within BWI76_RS22785at 4749.757 kb on - strand, within BWI76_RS22785at 4749.847 kb on + strand, within BWI76_RS22785at 4749.897 kb on - strand, within BWI76_RS22785at 4749.897 kb on - strand, within BWI76_RS22785at 4750.121 kb on - strand, within BWI76_RS22785at 4750.432 kb on - strand, within BWI76_RS22785at 4750.467 kb on + strand, within BWI76_RS22785

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Per-strain Table

Position Strand Gene LocusTag Fraction LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
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4,749,662 + BWI76_RS22785 0.16 -0.5
4,749,662 + BWI76_RS22785 0.16 -0.6
4,749,664 + BWI76_RS22785 0.17 +0.2
4,749,675 + BWI76_RS22785 0.18 -0.6
4,749,679 - BWI76_RS22785 0.18 -0.6
4,749,681 - BWI76_RS22785 0.18 +1.0
4,749,686 - BWI76_RS22785 0.19 -0.6
4,749,691 - BWI76_RS22785 0.19 -1.0
4,749,752 - BWI76_RS22785 0.25 -0.3
4,749,757 - BWI76_RS22785 0.25 +2.0
4,749,847 + BWI76_RS22785 0.33 -0.0
4,749,897 - BWI76_RS22785 0.38 -0.4
4,749,897 - BWI76_RS22785 0.38 +0.2
4,750,121 - BWI76_RS22785 0.58 -0.2
4,750,432 - BWI76_RS22785 0.86 +1.2
4,750,467 + BWI76_RS22785 0.89 +3.8

Or see this region's nucleotide sequence