Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09010
Experiment: LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 1,896,730 | + | +1.0 | |||
| 1,897,074 | - | +0.6 | |||
| 1,897,234 | + | -1.0 | |||
| 1,897,858 | - | BWI76_RS09010 | 0.15 | +0.2 | |
| 1,897,876 | + | BWI76_RS09010 | 0.17 | +0.2 | |
| 1,898,002 | - | BWI76_RS09010 | 0.28 | +0.1 | |
| 1,898,018 | - | BWI76_RS09010 | 0.30 | +0.3 | |
| 1,898,140 | + | BWI76_RS09010 | 0.41 | +1.0 | |
| 1,898,222 | - | BWI76_RS09010 | 0.48 | +1.4 | |
| 1,898,227 | - | BWI76_RS09010 | 0.49 | +0.6 | |
| 1,898,343 | - | BWI76_RS09010 | 0.59 | +0.7 | |
| 1,898,771 | - | -1.2 | |||
| 1,898,865 | - | -1.0 | |||
| 1,898,865 | - | +0.8 | |||
| 1,898,950 | - | +0.6 | |||
| 1,899,119 | - | BWI76_RS09015 | 0.21 | +0.0 | |
| 1,899,242 | + | BWI76_RS09015 | 0.32 | -0.5 | |
| 1,899,754 | + | BWI76_RS09015 | 0.82 | +0.4 | |
| 1,899,772 | - | BWI76_RS09015 | 0.83 | +0.9 |
Or see this region's nucleotide sequence