Experiment: D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS03265 and PFLU_RS03270 are separated by 24 nucleotides PFLU_RS03270 and PFLU_RS03275 are separated by 117 nucleotides
PFLU_RS03265: PFLU_RS03265 - zinc-binding alcohol dehydrogenase family protein, at 753,182 to 754,195
_RS03265
PFLU_RS03270: PFLU_RS03270 - antibiotic biosynthesis monooxygenase, at 754,220 to 754,513
_RS03270
PFLU_RS03275: PFLU_RS03275 - LysR family transcriptional regulator, at 754,631 to 755,557
_RS03275
Position (kb) 754
755 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 753.384 kb on + strand, within PFLU_RS03265 at 753.384 kb on + strand, within PFLU_RS03265 at 753.384 kb on + strand, within PFLU_RS03265 at 753.384 kb on + strand, within PFLU_RS03265 at 753.384 kb on + strand, within PFLU_RS03265 at 753.384 kb on + strand, within PFLU_RS03265 at 753.384 kb on + strand, within PFLU_RS03265 at 753.384 kb on + strand, within PFLU_RS03265 at 753.384 kb on + strand, within PFLU_RS03265 at 753.384 kb on + strand, within PFLU_RS03265 at 753.384 kb on + strand, within PFLU_RS03265 at 753.384 kb on + strand, within PFLU_RS03265 at 753.385 kb on - strand, within PFLU_RS03265 at 753.385 kb on - strand, within PFLU_RS03265 at 753.385 kb on - strand, within PFLU_RS03265 at 753.385 kb on - strand, within PFLU_RS03265 at 753.385 kb on - strand, within PFLU_RS03265 at 753.385 kb on - strand, within PFLU_RS03265 at 753.385 kb on - strand, within PFLU_RS03265 at 753.385 kb on - strand, within PFLU_RS03265 at 753.385 kb on - strand, within PFLU_RS03265 at 753.385 kb on - strand, within PFLU_RS03265 at 753.385 kb on - strand, within PFLU_RS03265 at 753.385 kb on - strand, within PFLU_RS03265 at 753.385 kb on - strand, within PFLU_RS03265 at 753.930 kb on + strand, within PFLU_RS03265 at 753.930 kb on + strand, within PFLU_RS03265 at 753.930 kb on + strand, within PFLU_RS03265 at 753.930 kb on + strand, within PFLU_RS03265 at 753.931 kb on - strand, within PFLU_RS03265 at 753.931 kb on - strand, within PFLU_RS03265 at 753.931 kb on - strand, within PFLU_RS03265 at 754.176 kb on + strand at 754.176 kb on + strand at 754.176 kb on + strand at 754.176 kb on + strand at 754.176 kb on + strand at 754.176 kb on + strand at 754.176 kb on + strand at 754.176 kb on + strand at 754.176 kb on + strand at 754.176 kb on + strand at 754.177 kb on - strand at 754.177 kb on - strand at 754.177 kb on - strand at 754.177 kb on - strand at 754.177 kb on - strand at 754.179 kb on + strand at 754.180 kb on - strand at 754.180 kb on - strand at 754.186 kb on + strand at 754.186 kb on + strand at 754.186 kb on + strand at 754.186 kb on + strand at 754.186 kb on + strand at 754.186 kb on + strand at 754.186 kb on + strand at 754.186 kb on + strand at 754.187 kb on - strand at 754.187 kb on - strand at 754.187 kb on - strand at 754.187 kb on - strand at 754.187 kb on - strand at 754.187 kb on - strand at 754.187 kb on - strand at 754.187 kb on - strand at 754.187 kb on - strand at 754.187 kb on - strand at 754.187 kb on - strand at 754.353 kb on + strand, within PFLU_RS03270 at 754.353 kb on + strand, within PFLU_RS03270 at 754.353 kb on + strand, within PFLU_RS03270 at 754.353 kb on + strand, within PFLU_RS03270 at 754.353 kb on + strand, within PFLU_RS03270 at 754.353 kb on + strand, within PFLU_RS03270 at 754.353 kb on + strand, within PFLU_RS03270 at 754.353 kb on + strand, within PFLU_RS03270 at 754.353 kb on + strand, within PFLU_RS03270 at 754.353 kb on + strand, within PFLU_RS03270 at 754.354 kb on - strand, within PFLU_RS03270 at 754.354 kb on - strand, within PFLU_RS03270 at 754.354 kb on - strand, within PFLU_RS03270 at 754.354 kb on - strand, within PFLU_RS03270 at 754.354 kb on - strand, within PFLU_RS03270 at 754.354 kb on - strand, within PFLU_RS03270 at 754.354 kb on - strand, within PFLU_RS03270 at 754.354 kb on - strand, within PFLU_RS03270 at 754.392 kb on + strand, within PFLU_RS03270 at 754.392 kb on + strand, within PFLU_RS03270 at 754.392 kb on + strand, within PFLU_RS03270 at 754.392 kb on + strand, within PFLU_RS03270 at 754.393 kb on - strand, within PFLU_RS03270 at 754.393 kb on - strand, within PFLU_RS03270 at 754.393 kb on - strand, within PFLU_RS03270 at 754.393 kb on - strand, within PFLU_RS03270 at 754.393 kb on - strand, within PFLU_RS03270 at 754.393 kb on - strand, within PFLU_RS03270 at 754.513 kb on + strand at 754.513 kb on + strand at 754.513 kb on + strand at 754.513 kb on + strand at 754.513 kb on + strand at 754.513 kb on + strand at 754.513 kb on + strand at 754.513 kb on + strand at 754.513 kb on + strand at 754.513 kb on + strand at 754.513 kb on + strand at 754.513 kb on + strand at 754.513 kb on + strand at 754.513 kb on + strand at 754.513 kb on + strand at 754.513 kb on + strand at 754.514 kb on - strand at 754.514 kb on - strand at 754.514 kb on - strand at 754.514 kb on - strand at 754.514 kb on - strand at 754.514 kb on - strand at 754.514 kb on - strand at 754.514 kb on - strand at 754.534 kb on + strand at 754.551 kb on + strand at 754.551 kb on + strand at 754.551 kb on + strand at 754.551 kb on + strand at 754.551 kb on + strand at 754.552 kb on - strand at 754.552 kb on - strand at 754.552 kb on - strand at 754.552 kb on - strand at 754.705 kb on - strand at 754.832 kb on + strand, within PFLU_RS03275 at 754.833 kb on - strand, within PFLU_RS03275 at 754.833 kb on - strand, within PFLU_RS03275 at 754.833 kb on - strand, within PFLU_RS03275 at 754.943 kb on - strand, within PFLU_RS03275 at 754.982 kb on + strand, within PFLU_RS03275 at 755.021 kb on - strand, within PFLU_RS03275 at 755.021 kb on - strand, within PFLU_RS03275 at 755.144 kb on + strand, within PFLU_RS03275 at 755.144 kb on + strand, within PFLU_RS03275 at 755.144 kb on + strand, within PFLU_RS03275 at 755.144 kb on + strand, within PFLU_RS03275 at 755.145 kb on - strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.207 kb on + strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.208 kb on - strand, within PFLU_RS03275 at 755.209 kb on + strand, within PFLU_RS03275 at 755.209 kb on + strand, within PFLU_RS03275 at 755.209 kb on + strand, within PFLU_RS03275 at 755.209 kb on + strand, within PFLU_RS03275 at 755.209 kb on + strand, within PFLU_RS03275 at 755.209 kb on + strand, within PFLU_RS03275 at 755.209 kb on + strand, within PFLU_RS03275 at 755.209 kb on + strand, within PFLU_RS03275 at 755.209 kb on + strand, within PFLU_RS03275 at 755.209 kb on + strand, within PFLU_RS03275 at 755.209 kb on + strand, within PFLU_RS03275 at 755.209 kb on + strand, within PFLU_RS03275 at 755.210 kb on - strand, within PFLU_RS03275 at 755.210 kb on - strand, within PFLU_RS03275 at 755.210 kb on - strand, within PFLU_RS03275 at 755.210 kb on - strand, within PFLU_RS03275 at 755.210 kb on - strand, within PFLU_RS03275 at 755.210 kb on - strand, within PFLU_RS03275 at 755.210 kb on - strand, within PFLU_RS03275 at 755.210 kb on - strand, within PFLU_RS03275 at 755.210 kb on - strand, within PFLU_RS03275 at 755.210 kb on - strand, within PFLU_RS03275 at 755.348 kb on + strand, within PFLU_RS03275 at 755.348 kb on + strand, within PFLU_RS03275 at 755.348 kb on + strand, within PFLU_RS03275 at 755.348 kb on + strand, within PFLU_RS03275 at 755.348 kb on + strand, within PFLU_RS03275 at 755.349 kb on - strand, within PFLU_RS03275 at 755.349 kb on - strand, within PFLU_RS03275 at 755.349 kb on - strand, within PFLU_RS03275 at 755.349 kb on - strand, within PFLU_RS03275 at 755.349 kb on - strand, within PFLU_RS03275 at 755.349 kb on - strand, within PFLU_RS03275 at 755.349 kb on - strand, within PFLU_RS03275
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS remove 753,384 + PFLU_RS03265 0.20 +0.1 753,384 + PFLU_RS03265 0.20 -0.6 753,384 + PFLU_RS03265 0.20 +1.7 753,384 + PFLU_RS03265 0.20 -1.6 753,384 + PFLU_RS03265 0.20 +0.5 753,384 + PFLU_RS03265 0.20 +0.8 753,384 + PFLU_RS03265 0.20 +1.1 753,384 + PFLU_RS03265 0.20 -1.5 753,384 + PFLU_RS03265 0.20 -1.3 753,384 + PFLU_RS03265 0.20 +0.3 753,384 + PFLU_RS03265 0.20 +0.7 753,384 + PFLU_RS03265 0.20 +0.8 753,385 - PFLU_RS03265 0.20 +0.4 753,385 - PFLU_RS03265 0.20 -0.0 753,385 - PFLU_RS03265 0.20 +0.5 753,385 - PFLU_RS03265 0.20 -1.3 753,385 - PFLU_RS03265 0.20 +0.9 753,385 - PFLU_RS03265 0.20 -1.2 753,385 - PFLU_RS03265 0.20 -1.5 753,385 - PFLU_RS03265 0.20 +1.8 753,385 - PFLU_RS03265 0.20 +0.5 753,385 - PFLU_RS03265 0.20 -1.2 753,385 - PFLU_RS03265 0.20 +2.8 753,385 - PFLU_RS03265 0.20 +1.5 753,385 - PFLU_RS03265 0.20 +0.1 753,930 + PFLU_RS03265 0.74 +0.0 753,930 + PFLU_RS03265 0.74 +0.5 753,930 + PFLU_RS03265 0.74 -0.3 753,930 + PFLU_RS03265 0.74 -2.0 753,931 - PFLU_RS03265 0.74 +1.5 753,931 - PFLU_RS03265 0.74 -2.3 753,931 - PFLU_RS03265 0.74 -0.3 754,176 + +0.7 754,176 + +1.6 754,176 + +2.9 754,176 + -1.1 754,176 + -0.4 754,176 + +0.0 754,176 + -0.8 754,176 + +0.5 754,176 + +1.5 754,176 + -0.5 754,177 - -0.3 754,177 - -0.8 754,177 - -0.2 754,177 - -0.6 754,177 - +0.2 754,179 + -0.1 754,180 - -0.5 754,180 - +2.5 754,186 + +1.5 754,186 + +0.5 754,186 + +0.5 754,186 + +0.6 754,186 + +1.0 754,186 + +1.9 754,186 + -1.0 754,186 + +1.4 754,187 - -1.5 754,187 - -0.3 754,187 - +2.1 754,187 - +0.4 754,187 - -0.1 754,187 - -0.3 754,187 - +0.7 754,187 - +0.3 754,187 - +0.1 754,187 - -0.1 754,187 - -0.5 754,353 + PFLU_RS03270 0.45 +0.4 754,353 + PFLU_RS03270 0.45 +1.0 754,353 + PFLU_RS03270 0.45 -1.3 754,353 + PFLU_RS03270 0.45 +0.6 754,353 + PFLU_RS03270 0.45 -1.2 754,353 + PFLU_RS03270 0.45 +1.5 754,353 + PFLU_RS03270 0.45 -0.3 754,353 + PFLU_RS03270 0.45 +0.6 754,353 + PFLU_RS03270 0.45 +0.2 754,353 + PFLU_RS03270 0.45 -0.3 754,354 - PFLU_RS03270 0.46 +3.1 754,354 - PFLU_RS03270 0.46 +0.3 754,354 - PFLU_RS03270 0.46 -0.6 754,354 - PFLU_RS03270 0.46 +2.4 754,354 - PFLU_RS03270 0.46 +2.4 754,354 - PFLU_RS03270 0.46 +1.2 754,354 - PFLU_RS03270 0.46 -0.4 754,354 - PFLU_RS03270 0.46 +1.0 754,392 + PFLU_RS03270 0.59 -0.2 754,392 + PFLU_RS03270 0.59 -0.5 754,392 + PFLU_RS03270 0.59 +0.0 754,392 + PFLU_RS03270 0.59 -1.5 754,393 - PFLU_RS03270 0.59 +2.9 754,393 - PFLU_RS03270 0.59 +0.9 754,393 - PFLU_RS03270 0.59 +0.3 754,393 - PFLU_RS03270 0.59 -1.0 754,393 - PFLU_RS03270 0.59 -0.1 754,393 - PFLU_RS03270 0.59 +0.8 754,513 + -0.5 754,513 + +2.7 754,513 + -2.5 754,513 + +0.8 754,513 + -2.0 754,513 + +2.1 754,513 + +0.1 754,513 + +0.3 754,513 + -0.3 754,513 + +0.1 754,513 + -0.2 754,513 + -1.0 754,513 + -1.0 754,513 + -1.5 754,513 + +1.5 754,513 + +1.1 754,514 - -1.5 754,514 - -0.9 754,514 - -2.2 754,514 - +1.1 754,514 - -2.3 754,514 - +0.1 754,514 - -1.0 754,514 - +0.8 754,534 + -0.7 754,551 + +1.1 754,551 + -0.0 754,551 + -2.3 754,551 + -1.5 754,551 + -0.2 754,552 - -1.9 754,552 - -0.5 754,552 - +2.1 754,552 - -0.7 754,705 - +0.1 754,832 + PFLU_RS03275 0.22 +0.5 754,833 - PFLU_RS03275 0.22 -0.2 754,833 - PFLU_RS03275 0.22 +0.0 754,833 - PFLU_RS03275 0.22 -1.0 754,943 - PFLU_RS03275 0.34 -0.2 754,982 + PFLU_RS03275 0.38 +0.7 755,021 - PFLU_RS03275 0.42 -1.2 755,021 - PFLU_RS03275 0.42 -0.6 755,144 + PFLU_RS03275 0.55 -1.8 755,144 + PFLU_RS03275 0.55 -0.2 755,144 + PFLU_RS03275 0.55 -0.3 755,144 + PFLU_RS03275 0.55 +0.1 755,145 - PFLU_RS03275 0.55 +1.4 755,207 + PFLU_RS03275 0.62 +1.1 755,207 + PFLU_RS03275 0.62 +0.7 755,207 + PFLU_RS03275 0.62 -0.6 755,207 + PFLU_RS03275 0.62 -0.2 755,207 + PFLU_RS03275 0.62 -0.1 755,207 + PFLU_RS03275 0.62 +2.5 755,207 + PFLU_RS03275 0.62 +0.9 755,207 + PFLU_RS03275 0.62 +1.2 755,207 + PFLU_RS03275 0.62 +0.2 755,207 + PFLU_RS03275 0.62 -1.3 755,207 + PFLU_RS03275 0.62 +0.1 755,207 + PFLU_RS03275 0.62 -1.1 755,207 + PFLU_RS03275 0.62 +2.1 755,207 + PFLU_RS03275 0.62 +0.7 755,207 + PFLU_RS03275 0.62 +0.0 755,207 + PFLU_RS03275 0.62 +1.7 755,207 + PFLU_RS03275 0.62 +2.2 755,207 + PFLU_RS03275 0.62 -0.7 755,207 + PFLU_RS03275 0.62 -0.1 755,207 + PFLU_RS03275 0.62 +1.3 755,207 + PFLU_RS03275 0.62 -1.9 755,207 + PFLU_RS03275 0.62 -1.0 755,207 + PFLU_RS03275 0.62 +0.1 755,207 + PFLU_RS03275 0.62 -0.6 755,207 + PFLU_RS03275 0.62 +2.1 755,207 + PFLU_RS03275 0.62 -2.1 755,207 + PFLU_RS03275 0.62 -1.1 755,207 + PFLU_RS03275 0.62 -1.1 755,208 - PFLU_RS03275 0.62 +0.1 755,208 - PFLU_RS03275 0.62 -1.6 755,208 - PFLU_RS03275 0.62 +0.2 755,208 - PFLU_RS03275 0.62 -0.5 755,208 - PFLU_RS03275 0.62 -1.5 755,208 - PFLU_RS03275 0.62 +0.9 755,208 - PFLU_RS03275 0.62 +1.1 755,208 - PFLU_RS03275 0.62 -0.5 755,208 - PFLU_RS03275 0.62 -1.2 755,208 - PFLU_RS03275 0.62 -0.6 755,208 - PFLU_RS03275 0.62 -0.5 755,208 - PFLU_RS03275 0.62 +1.8 755,208 - PFLU_RS03275 0.62 +0.5 755,208 - PFLU_RS03275 0.62 -0.2 755,208 - PFLU_RS03275 0.62 +1.3 755,208 - PFLU_RS03275 0.62 +0.8 755,208 - PFLU_RS03275 0.62 +0.1 755,208 - PFLU_RS03275 0.62 -1.0 755,208 - PFLU_RS03275 0.62 -0.8 755,208 - PFLU_RS03275 0.62 +0.6 755,208 - PFLU_RS03275 0.62 +0.3 755,208 - PFLU_RS03275 0.62 -1.5 755,208 - PFLU_RS03275 0.62 +1.1 755,208 - PFLU_RS03275 0.62 +1.6 755,208 - PFLU_RS03275 0.62 -0.5 755,208 - PFLU_RS03275 0.62 +0.1 755,208 - PFLU_RS03275 0.62 +0.0 755,208 - PFLU_RS03275 0.62 -1.6 755,208 - PFLU_RS03275 0.62 +0.5 755,208 - PFLU_RS03275 0.62 -0.7 755,208 - PFLU_RS03275 0.62 -1.6 755,209 + PFLU_RS03275 0.62 -0.3 755,209 + PFLU_RS03275 0.62 +0.3 755,209 + PFLU_RS03275 0.62 -0.2 755,209 + PFLU_RS03275 0.62 +0.1 755,209 + PFLU_RS03275 0.62 -0.0 755,209 + PFLU_RS03275 0.62 -0.9 755,209 + PFLU_RS03275 0.62 +0.4 755,209 + PFLU_RS03275 0.62 -1.5 755,209 + PFLU_RS03275 0.62 -2.0 755,209 + PFLU_RS03275 0.62 +0.8 755,209 + PFLU_RS03275 0.62 -2.3 755,209 + PFLU_RS03275 0.62 +0.0 755,210 - PFLU_RS03275 0.62 -0.8 755,210 - PFLU_RS03275 0.62 -1.6 755,210 - PFLU_RS03275 0.62 +0.1 755,210 - PFLU_RS03275 0.62 -1.3 755,210 - PFLU_RS03275 0.62 +0.6 755,210 - PFLU_RS03275 0.62 +0.1 755,210 - PFLU_RS03275 0.62 +0.0 755,210 - PFLU_RS03275 0.62 -1.2 755,210 - PFLU_RS03275 0.62 +1.3 755,210 - PFLU_RS03275 0.62 +0.4 755,348 + PFLU_RS03275 0.77 -1.1 755,348 + PFLU_RS03275 0.77 -0.4 755,348 + PFLU_RS03275 0.77 +0.5 755,348 + PFLU_RS03275 0.77 +0.8 755,348 + PFLU_RS03275 0.77 +1.4 755,349 - PFLU_RS03275 0.77 -0.7 755,349 - PFLU_RS03275 0.77 -2.7 755,349 - PFLU_RS03275 0.77 -0.1 755,349 - PFLU_RS03275 0.77 +0.9 755,349 - PFLU_RS03275 0.77 -0.3 755,349 - PFLU_RS03275 0.77 -1.6 755,349 - PFLU_RS03275 0.77 -0.1
Or see this region's nucleotide sequence