Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20945
Experiment: LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,378,272 | + | BWI76_RS20940 | 0.54 | +0.1 | |
4,378,730 | + | BWI76_RS20940 | 0.89 | +0.1 | |
4,378,758 | - | +1.3 | |||
4,379,050 | + | BWI76_RS20945 | 0.14 | +0.4 | |
4,379,060 | - | BWI76_RS20945 | 0.16 | +0.8 | |
4,379,261 | + | BWI76_RS20945 | 0.48 | +0.1 | |
4,379,477 | - | BWI76_RS20945 | 0.82 | -1.2 | |
4,379,701 | + | +0.1 | |||
4,379,701 | + | -0.4 | |||
4,379,709 | - | +0.4 | |||
4,379,943 | - | BWI76_RS20955 | 0.12 | -0.1 | |
4,380,026 | - | BWI76_RS20955 | 0.18 | -0.9 | |
4,380,122 | + | BWI76_RS20955 | 0.25 | -0.2 | |
4,380,301 | - | BWI76_RS20955 | 0.37 | -0.3 | |
4,380,302 | - | BWI76_RS20955 | 0.37 | -0.4 | |
4,380,324 | + | BWI76_RS20955 | 0.39 | +0.8 | |
4,380,359 | + | BWI76_RS20955 | 0.41 | +0.1 | |
4,380,359 | + | BWI76_RS20955 | 0.41 | +0.0 | |
4,380,367 | - | BWI76_RS20955 | 0.42 | -0.3 | |
4,380,522 | - | BWI76_RS20955 | 0.52 | -0.5 |
Or see this region's nucleotide sequence