Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14055
Experiment: LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 2,936,408 | + | BWI76_RS14050 | 0.26 | -2.3 | |
| 2,936,855 | + | BWI76_RS14050 | 0.74 | +0.3 | |
| 2,937,427 | + | BWI76_RS14055 | 0.14 | -0.7 | |
| 2,937,617 | - | BWI76_RS14055 | 0.33 | -1.6 | |
| 2,937,626 | + | BWI76_RS14055 | 0.34 | +0.3 | |
| 2,937,671 | - | -0.6 | |||
| 2,937,853 | + | BWI76_RS14055 | 0.56 | +0.5 | |
| 2,937,856 | + | BWI76_RS14055 | 0.56 | -0.9 | |
| 2,937,863 | - | BWI76_RS14055 | 0.57 | -1.1 | |
| 2,937,888 | - | BWI76_RS14055 | 0.59 | -1.8 | |
| 2,938,249 | - | -0.5 | |||
| 2,938,421 | + | +0.6 | |||
| 2,938,452 | - | -0.5 | |||
| 2,938,492 | - | -0.4 | |||
| 2,938,525 | - | +0.5 | |||
| 2,938,801 | - | BWI76_RS14060 | 0.28 | +0.3 | |
| 2,938,858 | - | BWI76_RS14060 | 0.33 | -0.1 | |
| 2,939,004 | + | BWI76_RS14060 | 0.46 | +0.2 | |
| 2,939,229 | + | BWI76_RS14060 | 0.66 | -1.0 |
Or see this region's nucleotide sequence