Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09565
Experiment: LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 2,000,108 | - | +0.1 | |||
| 2,000,178 | + | -0.6 | |||
| 2,000,441 | - | BWI76_RS09560 | 0.34 | +0.8 | |
| 2,000,602 | - | BWI76_RS09560 | 0.71 | -2.6 | |
| 2,000,916 | - | BWI76_RS09565 | 0.15 | +0.3 | |
| 2,000,965 | + | BWI76_RS09565 | 0.20 | +0.3 | |
| 2,001,280 | + | BWI76_RS09565 | 0.53 | +1.0 | |
| 2,001,288 | - | BWI76_RS09565 | 0.54 | +0.2 | |
| 2,001,446 | - | BWI76_RS09565 | 0.70 | +1.2 | |
| 2,001,562 | + | BWI76_RS09565 | 0.82 | -1.0 | |
| 2,001,966 | + | BWI76_RS09570 | 0.13 | -0.1 | |
| 2,002,022 | + | BWI76_RS09570 | 0.17 | -0.2 | |
| 2,002,096 | - | BWI76_RS09570 | 0.21 | -0.7 | |
| 2,002,134 | - | BWI76_RS09570 | 0.23 | -0.8 | |
| 2,002,249 | - | BWI76_RS09570 | 0.30 | -0.1 | |
| 2,002,592 | + | BWI76_RS09570 | 0.51 | -0.4 | |
| 2,002,643 | + | BWI76_RS09570 | 0.54 | -0.2 | |
| 2,002,668 | + | BWI76_RS09570 | 0.56 | -0.8 |
Or see this region's nucleotide sequence