Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09550
Experiment: LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 1,996,322 | - | BWI76_RS09545 | 0.35 | -0.4 | |
| 1,996,669 | - | BWI76_RS09545 | 0.59 | +0.7 | |
| 1,996,874 | + | BWI76_RS09545 | 0.73 | +0.1 | |
| 1,997,060 | - | BWI76_RS09545 | 0.86 | -0.2 | |
| 1,997,075 | + | BWI76_RS09545 | 0.87 | +1.8 | |
| 1,997,092 | + | BWI76_RS09545 | 0.88 | -0.7 | |
| 1,997,274 | - | +0.5 | |||
| 1,997,370 | - | BWI76_RS09550 | 0.10 | +1.8 | |
| 1,997,375 | - | BWI76_RS09550 | 0.11 | +0.1 | |
| 1,997,556 | - | BWI76_RS09550 | 0.29 | +0.8 | |
| 1,997,744 | - | BWI76_RS09550 | 0.48 | +0.4 | |
| 1,997,750 | - | BWI76_RS09550 | 0.48 | +1.2 | |
| 1,998,198 | - | +0.6 | |||
| 1,998,235 | + | +0.4 | |||
| 1,998,310 | - | +2.0 | |||
| 1,998,320 | + | +1.2 | |||
| 1,998,492 | + | +1.6 | |||
| 1,998,919 | - | BWI76_RS09555 | 0.29 | +0.3 | |
| 1,999,118 | - | BWI76_RS09555 | 0.40 | -0.5 |
Or see this region's nucleotide sequence