Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12595
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,628,058 | - | -0.3 | |||
2,628,400 | - | BWI76_RS12590 | 0.38 | +0.3 | |
2,628,416 | - | BWI76_RS12590 | 0.40 | +0.8 | |
2,628,484 | - | BWI76_RS12590 | 0.49 | -0.6 | |
2,628,771 | - | BWI76_RS12590 | 0.88 | -0.2 | |
2,628,771 | - | BWI76_RS12590 | 0.88 | +0.2 | |
2,629,141 | - | BWI76_RS12595 | 0.54 | -1.5 | |
2,629,198 | + | BWI76_RS12595 | 0.71 | -2.7 | |
2,629,230 | - | BWI76_RS12595 | 0.80 | -0.5 | |
2,629,282 | - | -1.3 | |||
2,629,372 | + | -0.2 | |||
2,629,380 | - | +1.5 | |||
2,629,819 | - | BWI76_RS12600 | 0.39 | +0.8 | |
2,629,864 | - | BWI76_RS12600 | 0.43 | +0.8 | |
2,629,927 | + | BWI76_RS12600 | 0.49 | +1.1 | |
2,630,077 | - | BWI76_RS12600 | 0.62 | -0.3 | |
2,630,215 | + | BWI76_RS12600 | 0.74 | -1.0 |
Or see this region's nucleotide sequence