Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10245
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,169,491 | + | -1.4 | |||
2,169,584 | - | -1.0 | |||
2,169,584 | - | +0.1 | |||
2,169,781 | - | BWI76_RS10245 | 0.15 | -2.2 | |
2,170,526 | + | BWI76_RS10245 | 0.77 | -0.9 | |
2,170,729 | + | +0.1 | |||
2,171,157 | - | BWI76_RS10250 | 0.26 | +0.6 | |
2,171,184 | - | BWI76_RS10250 | 0.28 | -4.0 | |
2,171,448 | + | BWI76_RS10250 | 0.52 | -0.6 | |
2,171,456 | - | BWI76_RS10250 | 0.53 | -0.2 | |
2,171,456 | - | BWI76_RS10250 | 0.53 | +0.7 | |
2,171,552 | + | BWI76_RS10250 | 0.61 | -1.4 |
Or see this region's nucleotide sequence