Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09755
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,045,259 | - | +0.7 | |||
2,045,259 | - | -2.4 | |||
2,045,337 | + | +0.7 | |||
2,045,347 | + | BWI76_RS09750 | 0.10 | +0.5 | |
2,045,354 | + | BWI76_RS09750 | 0.11 | -1.9 | |
2,045,361 | - | BWI76_RS09750 | 0.12 | -0.5 | |
2,045,433 | - | BWI76_RS09750 | 0.23 | -0.8 | |
2,045,490 | + | BWI76_RS09750 | 0.31 | -0.5 | |
2,045,778 | - | BWI76_RS09750 | 0.72 | -0.6 | |
2,045,796 | + | BWI76_RS09750 | 0.75 | +0.5 | |
2,045,934 | + | -0.4 | |||
2,045,999 | - | -1.9 | |||
2,046,054 | - | -1.9 | |||
2,046,172 | + | -1.9 | |||
2,046,342 | - | BWI76_RS09755 | 0.17 | +0.3 | |
2,046,471 | + | BWI76_RS09755 | 0.29 | +1.3 | |
2,046,808 | - | BWI76_RS09755 | 0.60 | -2.0 | |
2,046,851 | + | BWI76_RS09755 | 0.64 | +0.3 | |
2,046,910 | - | BWI76_RS09755 | 0.69 | +1.8 | |
2,046,910 | - | BWI76_RS09755 | 0.69 | -1.9 | |
2,046,931 | + | BWI76_RS09755 | 0.71 | -3.1 | |
2,046,972 | - | BWI76_RS09755 | 0.75 | -0.3 | |
2,047,428 | + | -0.7 | |||
2,048,002 | + | BWI76_RS09760 | 0.53 | +0.3 | |
2,048,002 | + | BWI76_RS09760 | 0.53 | -0.3 | |
2,048,002 | + | BWI76_RS09760 | 0.53 | -1.9 | |
2,048,119 | - | BWI76_RS09760 | 0.63 | -0.7 |
Or see this region's nucleotide sequence