Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05430
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
1,139,205 | - | -0.4 | |||
1,139,242 | + | -0.5 | |||
1,139,367 | - | +0.2 | |||
1,139,456 | + | BWI76_RS05425 | 0.20 | -1.3 | |
1,139,801 | - | BWI76_RS05425 | 0.62 | +0.4 | |
1,139,890 | - | BWI76_RS05425 | 0.73 | +0.0 | |
1,140,133 | + | -2.1 | |||
1,140,211 | - | +0.8 | |||
1,140,243 | + | -0.1 | |||
1,140,251 | - | -0.3 | |||
1,140,256 | - | +0.4 | |||
1,140,481 | + | BWI76_RS05430 | 0.38 | +0.7 | |
1,140,540 | + | BWI76_RS05430 | 0.46 | +0.0 | |
1,140,752 | - | BWI76_RS05430 | 0.73 | +1.6 | |
1,141,076 | - | +0.4 | |||
1,141,147 | - | +0.2 | |||
1,141,154 | + | BWI76_RS05435 | 0.10 | -0.0 | |
1,141,358 | + | BWI76_RS05435 | 0.25 | -2.6 | |
1,141,378 | - | BWI76_RS05435 | 0.26 | -0.0 | |
1,141,415 | + | BWI76_RS05435 | 0.29 | +0.9 | |
1,141,503 | - | BWI76_RS05435 | 0.36 | -0.3 | |
1,141,592 | + | BWI76_RS05435 | 0.42 | -1.5 | |
1,141,632 | - | BWI76_RS05435 | 0.45 | +0.8 | |
1,141,795 | - | BWI76_RS05435 | 0.57 | -0.1 |
Or see this region's nucleotide sequence