Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS26865

Experiment: Betaine (C)(N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with MOPS; with chloride
5,996,539	+		PFLU_RS26855	0.37	-1.2
5,996,539	+		PFLU_RS26855	0.37	-1.2
5,996,540	-		PFLU_RS26855	0.37	+0.6
5,996,540	-		PFLU_RS26855	0.37	-1.9
5,996,540	-		PFLU_RS26855	0.37	-2.2
5,996,540	-		PFLU_RS26855	0.37	-2.6
5,996,540	-		PFLU_RS26855	0.37	+0.9
5,996,563	+		PFLU_RS26855	0.40	-0.3
5,996,564	-		PFLU_RS26855	0.40	-1.3
5,996,564	-		PFLU_RS26855	0.40	-0.7
5,996,564	-		PFLU_RS26855	0.40	-1.7
5,996,564	-		PFLU_RS26855	0.40	+0.8
5,996,728	+		PFLU_RS26855	0.61	-0.6
5,996,728	+		PFLU_RS26855	0.61	-1.3
5,996,728	+		PFLU_RS26855	0.61	-3.3
5,996,728	+		PFLU_RS26855	0.61	+0.7
5,996,728	+		PFLU_RS26855	0.61	-1.3
5,996,728	+		PFLU_RS26855	0.61	-0.4
5,996,728	+		PFLU_RS26855	0.61	+2.3
5,996,728	+		PFLU_RS26855	0.61	-1.1
5,996,729	-		PFLU_RS26855	0.61	+0.4
5,996,729	-		PFLU_RS26855	0.61	-0.0
5,996,729	-		PFLU_RS26855	0.61	+1.2
5,996,738	+		PFLU_RS26855	0.62	+1.6
5,997,061	-				-0.6
5,997,066	+				+0.6
5,997,066	+				+0.2
5,997,066	+				-1.9
5,997,066	+				+1.7
5,997,066	+				-1.1
5,997,066	+				+1.0
5,997,066	+				+0.8
5,997,066	+				-1.5
5,997,066	+				+0.3
5,997,066	+				-0.4
5,997,066	+				+0.8
5,997,066	+				+0.7
5,997,066	+				+2.3
5,997,067	-				-0.0
5,997,067	-				-1.3
5,997,067	-				-0.0
5,997,067	-				+1.0
5,997,067	-				+0.7
5,997,067	-				-2.8
5,997,067	-				-0.3
5,997,067	-				+0.5
5,997,067	-				-2.1
5,997,067	-				-1.5
5,997,067	-				-2.0
5,997,067	-				-0.0
5,997,067	-				-1.6
5,997,226	+		PFLU_RS26860	0.45	+1.6
5,997,226	+		PFLU_RS26860	0.45	+0.5
5,997,227	-		PFLU_RS26860	0.46	-1.7
5,997,227	-		PFLU_RS26860	0.46	-0.5
5,997,262	+		PFLU_RS26860	0.54	-0.5
5,997,262	+		PFLU_RS26860	0.54	-0.7
5,997,262	+		PFLU_RS26860	0.54	+1.0
5,997,262	+		PFLU_RS26860	0.54	-1.0
5,997,262	+		PFLU_RS26860	0.54	-1.7
5,997,262	+		PFLU_RS26860	0.54	-2.2
5,997,262	+		PFLU_RS26860	0.54	-2.1
5,997,262	+		PFLU_RS26860	0.54	-3.1
5,997,263	-		PFLU_RS26860	0.54	+1.7
5,997,263	-		PFLU_RS26860	0.54	-2.1
5,997,263	-		PFLU_RS26860	0.54	-0.7
5,997,263	-		PFLU_RS26860	0.54	+0.6
5,997,265	-		PFLU_RS26860	0.55	+0.4
5,997,405	+		PFLU_RS26860	0.88	-0.5
5,997,405	+		PFLU_RS26860	0.88	-0.3
5,997,405	+		PFLU_RS26860	0.88	+2.4
5,997,405	+		PFLU_RS26860	0.88	-1.4
5,997,405	+		PFLU_RS26860	0.88	-0.4
5,997,406	-		PFLU_RS26860	0.88	-0.9
5,997,406	-		PFLU_RS26860	0.88	-0.1
5,997,484	-				-1.6
5,998,109	+				-0.1
5,998,109	+				+1.6
5,998,109	+				-1.7
5,998,109	+				+0.3
5,998,109	+				+0.6
5,998,109	+				-0.9
5,998,109	+				+0.2
5,998,109	+				+0.7
5,998,109	+				-1.0
5,998,109	+				+1.4
5,998,109	+				+0.6
5,998,109	+				-1.8
5,998,110	-				+0.1
5,998,110	-				-0.5
5,998,110	-				+0.3
5,998,110	-				-1.9
5,998,110	-				-0.0
5,998,110	-				-0.2
5,998,110	-				-2.0
5,998,110	-				+2.3
5,998,110	-				-1.4
5,998,110	-				-1.9
5,998,110	-				-0.9
5,998,110	-				+1.7
5,998,123	+				-0.3
5,998,123	+				-2.5
5,998,123	+				+0.4
5,998,123	+				-1.3
5,998,123	+				-1.2
5,998,123	+				-1.8
5,998,124	-				-0.1
5,998,124	-				-1.2
5,998,124	-				-3.4
5,998,124	-				-0.6
5,998,133	+				+2.3
5,998,133	+				+0.3
5,998,133	+				+0.1
5,998,133	+				-0.3
5,998,133	+				+0.3
5,998,134	-				-0.2
5,998,134	-				-1.0
5,998,143	+				+1.3
5,998,143	+				+1.9
5,998,144	-				-1.2
5,998,152	+				+2.8
5,998,152	+				+0.1
5,998,153	-				+1.4
5,998,190	+				+0.9
5,998,190	+				+0.9
5,998,190	+				-0.8
5,998,190	+				-2.3
5,998,190	+				+1.6
5,998,190	+				-2.4
5,998,190	+				-1.9
5,998,190	+				-1.7
5,998,190	+				+0.6
5,998,190	+				-1.0
5,998,190	+				-0.9
5,998,190	+				+2.8
5,998,190	+				-0.5
5,998,190	+				-0.8
5,998,190	+				-2.6
5,998,190	+				-0.7
5,998,190	+				-0.8
5,998,191	-				-2.1
5,998,191	-				-3.0
5,998,191	-				+0.1
5,998,191	-				-1.0
5,998,191	-				-0.3
5,998,191	-				-1.0
5,998,191	-				-0.6
5,998,191	-				-0.2
5,998,191	-				-0.0
5,998,191	-				+0.6
5,998,191	-				+1.5
5,998,191	-				+1.0
5,998,191	-				+0.9
5,998,191	-				-1.6
5,998,191	-				+0.1
5,998,191	-				+1.0
5,998,191	-				+1.1
5,998,199	+				-1.2
5,998,200	-				+1.3
5,998,200	-				+0.4
5,998,255	+				-2.7
5,998,255	+				-1.2
5,998,256	-				-1.1
5,998,259	-				+0.9
5,998,270	-				+0.6
5,998,270	-				+3.3
5,998,317	+		PFLU_RS26870	0.16	-1.1
5,998,328	+		PFLU_RS26870	0.18	-1.8
5,998,328	+		PFLU_RS26870	0.18	+1.4
5,998,328	+		PFLU_RS26870	0.18	+2.3
5,998,328	+		PFLU_RS26870	0.18	-0.6
5,998,329	-		PFLU_RS26870	0.18	+0.3
5,998,329	-		PFLU_RS26870	0.18	+1.0
5,998,329	-		PFLU_RS26870	0.18	-1.1
5,998,329	-		PFLU_RS26870	0.18	-2.1
5,998,359	+		PFLU_RS26870	0.22	-1.5
5,998,359	+		PFLU_RS26870	0.22	-1.0
5,998,359	+		PFLU_RS26870	0.22	+0.2
5,998,359	+		PFLU_RS26870	0.22	+0.1
5,998,360	-		PFLU_RS26870	0.22	-1.6
5,998,360	-		PFLU_RS26870	0.22	+1.3
5,998,360	-		PFLU_RS26870	0.22	-0.4
5,998,360	-		PFLU_RS26870	0.22	-3.0
5,998,360	-		PFLU_RS26870	0.22	-0.6
5,998,360	-		PFLU_RS26870	0.22	+0.7
5,998,390	+		PFLU_RS26870	0.26	-0.2
5,998,391	-		PFLU_RS26870	0.26	+1.6
5,998,419	+		PFLU_RS26870	0.30	-2.1
5,998,419	+		PFLU_RS26870	0.30	+2.6
5,998,420	-		PFLU_RS26870	0.30	-0.7
5,998,421	+		PFLU_RS26870	0.31	+0.3
5,998,421	+		PFLU_RS26870	0.31	-0.1
5,998,421	+		PFLU_RS26870	0.31	+1.5
5,998,421	+		PFLU_RS26870	0.31	+0.9
5,998,421	+		PFLU_RS26870	0.31	+0.4
5,998,421	+		PFLU_RS26870	0.31	-1.2
5,998,421	+		PFLU_RS26870	0.31	-1.8
5,998,421	+		PFLU_RS26870	0.31	+2.2
5,998,421	+		PFLU_RS26870	0.31	-2.9
5,998,421	+		PFLU_RS26870	0.31	+0.7
5,998,421	+		PFLU_RS26870	0.31	+0.1
5,998,421	+		PFLU_RS26870	0.31	+0.3
5,998,421	+		PFLU_RS26870	0.31	+0.3
5,998,421	+		PFLU_RS26870	0.31	-1.3
5,998,422	-		PFLU_RS26870	0.31	-0.1
5,998,422	-		PFLU_RS26870	0.31	+0.7
5,998,422	-		PFLU_RS26870	0.31	-0.8
5,998,422	-		PFLU_RS26870	0.31	-1.9
5,998,422	-		PFLU_RS26870	0.31	-0.0
5,998,492	+		PFLU_RS26870	0.40	+0.6
5,998,492	+		PFLU_RS26870	0.40	-0.2
5,998,492	+		PFLU_RS26870	0.40	-0.3
5,998,492	+		PFLU_RS26870	0.40	+0.4
5,998,493	-		PFLU_RS26870	0.40	+2.0
5,998,493	-		PFLU_RS26870	0.40	+2.7
5,998,493	-		PFLU_RS26870	0.40	+0.1
5,998,493	-		PFLU_RS26870	0.40	-0.9
5,998,505	+		PFLU_RS26870	0.42	-0.7
5,998,505	+		PFLU_RS26870	0.42	-2.9
5,998,505	+		PFLU_RS26870	0.42	-1.3
5,998,505	+		PFLU_RS26870	0.42	+4.0
5,998,505	+		PFLU_RS26870	0.42	-1.3
5,998,505	+		PFLU_RS26870	0.42	+1.9
5,998,505	+		PFLU_RS26870	0.42	-1.0
5,998,506	-		PFLU_RS26870	0.42	-2.2
5,998,506	-		PFLU_RS26870	0.42	-0.1
5,998,506	-		PFLU_RS26870	0.42	-0.4
5,998,506	-		PFLU_RS26870	0.42	+0.6
5,998,506	-		PFLU_RS26870	0.42	-1.0
5,998,518	+		PFLU_RS26870	0.44	-1.4
5,998,518	+		PFLU_RS26870	0.44	-1.2
5,998,518	+		PFLU_RS26870	0.44	+0.9
5,998,518	+		PFLU_RS26870	0.44	+3.6
5,998,518	+		PFLU_RS26870	0.44	+0.6
5,998,518	+		PFLU_RS26870	0.44	+1.9
5,998,518	+		PFLU_RS26870	0.44	-1.5
5,998,518	+		PFLU_RS26870	0.44	-1.7
5,998,518	+		PFLU_RS26870	0.44	-2.6
5,998,518	+		PFLU_RS26870	0.44	+1.0
5,998,519	-		PFLU_RS26870	0.44	+1.6
5,998,519	-		PFLU_RS26870	0.44	+2.1
5,998,519	-		PFLU_RS26870	0.44	+2.2
5,998,519	-		PFLU_RS26870	0.44	+1.3
5,998,519	-		PFLU_RS26870	0.44	-0.2
5,998,519	-		PFLU_RS26870	0.44	+1.3
5,998,519	-		PFLU_RS26870	0.44	-0.7
5,998,519	-		PFLU_RS26870	0.44	+1.3
5,998,520	+		PFLU_RS26870	0.44	-1.7
5,998,520	+		PFLU_RS26870	0.44	+1.9
5,998,520	+		PFLU_RS26870	0.44	+0.8
5,998,520	+		PFLU_RS26870	0.44	-2.5
5,998,544	+		PFLU_RS26870	0.47	-0.0
5,998,544	+		PFLU_RS26870	0.47	+2.6
5,998,598	+		PFLU_RS26870	0.55	+0.3
5,998,598	+		PFLU_RS26870	0.55	+1.0
5,998,598	+		PFLU_RS26870	0.55	-0.4
5,998,598	+		PFLU_RS26870	0.55	-0.4
5,998,599	-		PFLU_RS26870	0.55	+0.7
5,998,599	-		PFLU_RS26870	0.55	+0.8
5,998,599	-		PFLU_RS26870	0.55	-0.3
5,998,599	-		PFLU_RS26870	0.55	-0.3
5,998,599	-		PFLU_RS26870	0.55	-0.0
5,998,599	-		PFLU_RS26870	0.55	+0.4
5,998,599	-		PFLU_RS26870	0.55	-1.0
5,998,631	+		PFLU_RS26870	0.59	-1.7
5,998,715	+		PFLU_RS26870	0.71	-1.2
5,998,715	+		PFLU_RS26870	0.71	-2.5
5,998,715	+		PFLU_RS26870	0.71	-0.6
5,998,716	-		PFLU_RS26870	0.71	+2.2
5,998,759	+		PFLU_RS26870	0.77	-2.7
5,998,759	+		PFLU_RS26870	0.77	+0.7
5,998,759	+		PFLU_RS26870	0.77	+3.9
5,998,759	+		PFLU_RS26870	0.77	-2.4
5,998,759	+		PFLU_RS26870	0.77	-2.5
5,998,760	-		PFLU_RS26870	0.77	-0.8
5,998,760	-		PFLU_RS26870	0.77	-0.9
5,998,760	-		PFLU_RS26870	0.77	+1.6
5,998,760	-		PFLU_RS26870	0.77	+2.6
5,998,760	-		PFLU_RS26870	0.77	-0.7
5,998,760	-		PFLU_RS26870	0.77	+0.5
5,998,760	-		PFLU_RS26870	0.77	+1.6
5,998,771	+		PFLU_RS26870	0.79	-3.1
5,998,771	+		PFLU_RS26870	0.79	+0.7
5,998,771	+		PFLU_RS26870	0.79	+1.1
5,998,771	+		PFLU_RS26870	0.79	-1.0
5,998,771	+		PFLU_RS26870	0.79	-2.4
5,998,771	+		PFLU_RS26870	0.79	-0.5
5,998,772	-		PFLU_RS26870	0.79	+0.4
5,998,772	-		PFLU_RS26870	0.79	+0.9
5,998,772	-		PFLU_RS26870	0.79	+0.9
5,998,808	+		PFLU_RS26870	0.84	+1.6
5,998,808	+		PFLU_RS26870	0.84	-2.0
5,998,808	+		PFLU_RS26870	0.84	+1.0
5,998,808	+		PFLU_RS26870	0.84	-1.3
5,998,808	+		PFLU_RS26870	0.84	-1.9
5,998,808	+		PFLU_RS26870	0.84	-0.7
5,998,808	+		PFLU_RS26870	0.84	-0.0
5,998,809	-		PFLU_RS26870	0.84	+1.0
5,998,809	-		PFLU_RS26870	0.84	+2.2
5,998,809	-		PFLU_RS26870	0.84	+0.7
5,998,809	-		PFLU_RS26870	0.84	-1.2
5,998,809	-		PFLU_RS26870	0.84	-0.3
5,998,809	-		PFLU_RS26870	0.84	-1.7
5,998,809	-		PFLU_RS26870	0.84	+1.9
5,998,809	-		PFLU_RS26870	0.84	-1.9
5,998,809	-		PFLU_RS26870	0.84	+1.3
5,998,809	-		PFLU_RS26870	0.84	+0.3
5,998,809	-		PFLU_RS26870	0.84	-1.6
5,998,809	-		PFLU_RS26870	0.84	-2.1
5,998,927	-				-1.2
5,998,940	+				-0.4
5,998,940	+				-2.4
5,998,940	+				-2.2
5,998,940	+				+2.3
5,998,940	+				-0.9
5,998,940	+				-0.0
5,998,941	-				-0.0
5,998,941	-				-0.8
5,998,941	-				-1.9
5,998,941	-				-0.7
5,998,946	+				-1.3
5,998,946	+				-0.6
5,998,946	+				+0.6
5,998,946	+				-1.5
5,998,946	+				+1.0
5,998,946	+				-1.7
5,998,946	+				-2.1
5,998,947	-				-1.1
5,998,947	-				+0.0
5,998,947	-				+0.6
5,998,947	-				+1.5
5,998,947	-				-3.1
5,998,947	-				+0.2
5,998,947	-				+1.9
5,998,947	-				+1.5
5,998,947	-				+0.6
5,998,957	+				-0.7
5,998,957	+				-1.3
5,998,957	+				-2.3
5,998,957	+				+0.6
5,998,957	+				+0.6
5,998,958	-				-0.7
5,998,958	-				-2.2
5,998,965	+				+0.8
5,998,966	-				-0.4
5,998,966	-				-0.4
5,998,967	+				-2.5
5,998,967	+				+0.4
5,998,968	-				-1.3
5,998,968	-				+0.5
5,998,968	-				+0.6
5,998,968	-				-1.9
5,998,968	-				+0.5
5,998,968	-				+1.0
5,998,968	-				-0.2
5,998,968	-				-1.3