Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS14625

Experiment: Betaine (C)(N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with MOPS; with chloride
3,267,407	+		PFLU_RS14620	0.13	-0.7
3,267,407	+		PFLU_RS14620	0.13	-0.1
3,267,408	-		PFLU_RS14620	0.14	-0.9
3,267,408	-		PFLU_RS14620	0.14	+0.9
3,267,408	-		PFLU_RS14620	0.14	-1.6
3,267,521	+		PFLU_RS14620	0.25	-0.9
3,267,521	+		PFLU_RS14620	0.25	+0.6
3,267,521	+		PFLU_RS14620	0.25	+0.9
3,267,521	+		PFLU_RS14620	0.25	+0.5
3,267,521	+		PFLU_RS14620	0.25	-1.8
3,267,521	+		PFLU_RS14620	0.25	-0.0
3,267,521	+		PFLU_RS14620	0.25	+2.5
3,267,521	+		PFLU_RS14620	0.25	+0.9
3,267,522	-		PFLU_RS14620	0.25	+1.7
3,267,522	-		PFLU_RS14620	0.25	-1.1
3,267,522	-		PFLU_RS14620	0.25	+1.2
3,267,622	+		PFLU_RS14620	0.35	+1.2
3,267,623	-		PFLU_RS14620	0.35	-1.4
3,267,635	+		PFLU_RS14620	0.36	-1.7
3,267,635	+		PFLU_RS14620	0.36	-0.4
3,267,636	-		PFLU_RS14620	0.36	+3.6
3,267,636	-		PFLU_RS14620	0.36	-2.8
3,267,636	-		PFLU_RS14620	0.36	-1.9
3,267,636	-		PFLU_RS14620	0.36	-1.8
3,267,636	-		PFLU_RS14620	0.36	-0.7
3,267,671	+		PFLU_RS14620	0.40	-2.2
3,267,672	-		PFLU_RS14620	0.40	+0.9
3,267,679	+		PFLU_RS14620	0.40	+2.5
3,267,679	+		PFLU_RS14620	0.40	-1.3
3,267,679	+		PFLU_RS14620	0.40	-0.4
3,267,679	+		PFLU_RS14620	0.40	+1.9
3,267,679	+		PFLU_RS14620	0.40	-2.0
3,267,679	+		PFLU_RS14620	0.40	-1.1
3,267,679	+		PFLU_RS14620	0.40	-1.1
3,267,680	-		PFLU_RS14620	0.40	-1.7
3,267,680	-		PFLU_RS14620	0.40	+0.3
3,267,680	-		PFLU_RS14620	0.40	+0.3
3,267,680	-		PFLU_RS14620	0.40	-1.4
3,267,680	-		PFLU_RS14620	0.40	+1.4
3,267,693	-		PFLU_RS14620	0.42	-0.4
3,267,693	-		PFLU_RS14620	0.42	+0.3
3,267,746	+		PFLU_RS14620	0.47	+2.1
3,267,746	+		PFLU_RS14620	0.47	+1.9
3,267,746	+		PFLU_RS14620	0.47	+0.6
3,267,746	+		PFLU_RS14620	0.47	-2.9
3,267,746	+		PFLU_RS14620	0.47	-0.7
3,267,747	-		PFLU_RS14620	0.47	-1.6
3,267,747	-		PFLU_RS14620	0.47	-0.6
3,267,828	-		PFLU_RS14620	0.55	-1.4
3,267,929	+		PFLU_RS14620	0.65	-0.9
3,267,929	+		PFLU_RS14620	0.65	-0.8
3,267,930	-		PFLU_RS14620	0.65	-1.3
3,267,930	-		PFLU_RS14620	0.65	-1.3
3,267,930	-		PFLU_RS14620	0.65	+0.9
3,267,930	-		PFLU_RS14620	0.65	+1.3
3,267,930	-		PFLU_RS14620	0.65	-0.9
3,267,930	-		PFLU_RS14620	0.65	-1.3
3,267,930	-		PFLU_RS14620	0.65	-0.6
3,267,930	-		PFLU_RS14620	0.65	-0.1
3,267,930	-		PFLU_RS14620	0.65	-0.4
3,267,930	-		PFLU_RS14620	0.65	+0.6
3,267,930	-		PFLU_RS14620	0.65	+1.6
3,267,932	+		PFLU_RS14620	0.65	-1.0
3,267,932	+		PFLU_RS14620	0.65	+1.0
3,267,932	+		PFLU_RS14620	0.65	-1.4
3,267,932	+		PFLU_RS14620	0.65	-0.1
3,267,932	+		PFLU_RS14620	0.65	+0.3
3,267,932	+		PFLU_RS14620	0.65	+1.8
3,267,932	+		PFLU_RS14620	0.65	-1.1
3,267,932	+		PFLU_RS14620	0.65	-0.9
3,267,932	+		PFLU_RS14620	0.65	-1.9
3,267,932	+		PFLU_RS14620	0.65	-1.7
3,267,932	+		PFLU_RS14620	0.65	+1.9
3,267,932	+		PFLU_RS14620	0.65	-0.1
3,267,932	+		PFLU_RS14620	0.65	-0.2
3,267,932	+		PFLU_RS14620	0.65	+1.0
3,267,932	+		PFLU_RS14620	0.65	+1.0
3,267,932	+		PFLU_RS14620	0.65	-0.1
3,267,932	+		PFLU_RS14620	0.65	-1.6
3,267,932	+		PFLU_RS14620	0.65	-0.4
3,267,932	+		PFLU_RS14620	0.65	+3.3
3,267,932	+		PFLU_RS14620	0.65	+0.0
3,267,932	+		PFLU_RS14620	0.65	+0.9
3,267,933	-		PFLU_RS14620	0.65	-1.0
3,267,933	-		PFLU_RS14620	0.65	-1.1
3,267,933	-		PFLU_RS14620	0.65	-0.4
3,267,933	-		PFLU_RS14620	0.65	-1.7
3,267,933	-		PFLU_RS14620	0.65	+1.2
3,267,933	-		PFLU_RS14620	0.65	-1.1
3,267,933	-		PFLU_RS14620	0.65	-2.1
3,267,933	-		PFLU_RS14620	0.65	+1.3
3,267,933	-		PFLU_RS14620	0.65	-2.2
3,267,933	-		PFLU_RS14620	0.65	-0.4
3,267,933	-		PFLU_RS14620	0.65	-0.1
3,267,933	-		PFLU_RS14620	0.65	-0.7
3,267,933	-		PFLU_RS14620	0.65	-2.3
3,267,933	-		PFLU_RS14620	0.65	+1.6
3,267,933	-		PFLU_RS14620	0.65	-2.0
3,267,933	-		PFLU_RS14620	0.65	+1.9
3,267,933	-		PFLU_RS14620	0.65	+3.6
3,267,933	-		PFLU_RS14620	0.65	+1.5
3,267,933	-		PFLU_RS14620	0.65	+1.9
3,267,944	+		PFLU_RS14620	0.67	+2.3
3,267,944	+		PFLU_RS14620	0.67	-1.7
3,267,944	+		PFLU_RS14620	0.67	+1.5
3,267,944	+		PFLU_RS14620	0.67	-1.9
3,267,945	-		PFLU_RS14620	0.67	-0.1
3,267,945	-		PFLU_RS14620	0.67	+0.9
3,267,945	-		PFLU_RS14620	0.67	+1.4
3,267,990	+		PFLU_RS14620	0.71	+3.5
3,267,990	+		PFLU_RS14620	0.71	+1.7
3,267,990	+		PFLU_RS14620	0.71	+0.1
3,267,991	-		PFLU_RS14620	0.71	+0.3
3,267,991	-		PFLU_RS14620	0.71	-1.3
3,267,991	-		PFLU_RS14620	0.71	+0.9
3,267,991	-		PFLU_RS14620	0.71	-0.4
3,268,012	-		PFLU_RS14620	0.73	+0.2
3,268,124	+		PFLU_RS14620	0.84	-1.7
3,268,124	+		PFLU_RS14620	0.84	-1.6
3,268,124	+		PFLU_RS14620	0.84	+2.3
3,268,125	-		PFLU_RS14620	0.84	+3.9
3,268,125	-		PFLU_RS14620	0.84	-0.6
3,268,275	-				-2.4
3,268,275	-				+1.3
3,268,285	+				-1.6
3,268,285	+				+1.9
3,268,285	+				-0.7
3,268,286	-				-0.6
3,268,286	-				+0.9
3,268,306	+				+0.4
3,268,306	+				-0.8
3,268,307	-				-1.9
3,268,307	-				+1.0
3,268,318	+				-1.1
3,268,318	+				-1.7
3,268,319	-				+0.9
3,268,427	+				+0.2
3,268,427	+				+1.1
3,268,428	-				+0.3
3,268,545	+		PFLU_RS14625	0.20	+1.6
3,268,545	+		PFLU_RS14625	0.20	-0.4
3,268,605	+		PFLU_RS14625	0.27	-0.9
3,268,606	-		PFLU_RS14625	0.27	-2.2
3,268,606	-		PFLU_RS14625	0.27	+0.6
3,268,606	-		PFLU_RS14625	0.27	-1.4
3,268,686	+		PFLU_RS14625	0.36	+0.3
3,268,686	+		PFLU_RS14625	0.36	+0.1
3,268,686	+		PFLU_RS14625	0.36	+0.6
3,268,686	+		PFLU_RS14625	0.36	+4.7
3,268,686	+		PFLU_RS14625	0.36	+1.0
3,268,686	+		PFLU_RS14625	0.36	-0.1
3,268,687	-		PFLU_RS14625	0.36	-3.0
3,268,687	-		PFLU_RS14625	0.36	+0.2
3,268,687	-		PFLU_RS14625	0.36	+0.9
3,268,687	-		PFLU_RS14625	0.36	+1.2
3,268,687	-		PFLU_RS14625	0.36	-2.0
3,268,687	-		PFLU_RS14625	0.36	+1.2
3,268,750	-		PFLU_RS14625	0.43	+2.5
3,268,750	-		PFLU_RS14625	0.43	+2.4
3,268,750	-		PFLU_RS14625	0.43	-0.1
3,268,750	-		PFLU_RS14625	0.43	+0.3
3,268,750	-		PFLU_RS14625	0.43	+3.1
3,268,803	-		PFLU_RS14625	0.49	-1.9
3,268,986	-		PFLU_RS14625	0.69	+1.2
3,269,468	+		PFLU_RS14630	0.15	+0.8
3,269,593	+		PFLU_RS14630	0.32	+1.4
3,269,593	+		PFLU_RS14630	0.32	-1.7
3,269,593	+		PFLU_RS14630	0.32	+0.3
3,269,594	-		PFLU_RS14630	0.32	-1.4
3,269,594	-		PFLU_RS14630	0.32	+0.1
3,269,594	-		PFLU_RS14630	0.32	+0.3
3,269,669	+		PFLU_RS14630	0.43	+0.1
3,269,669	+		PFLU_RS14630	0.43	-0.1
3,269,669	+		PFLU_RS14630	0.43	-0.7
3,269,669	+		PFLU_RS14630	0.43	-0.4
3,269,669	+		PFLU_RS14630	0.43	-1.4
3,269,669	+		PFLU_RS14630	0.43	-1.4
3,269,669	+		PFLU_RS14630	0.43	+1.9
3,269,669	+		PFLU_RS14630	0.43	+0.9
3,269,670	-		PFLU_RS14630	0.43	+1.5
3,269,670	-		PFLU_RS14630	0.43	+0.9
3,269,670	-		PFLU_RS14630	0.43	-0.9
3,269,670	-		PFLU_RS14630	0.43	-1.6
3,269,670	-		PFLU_RS14630	0.43	+0.5
3,269,670	-		PFLU_RS14630	0.43	-0.1
3,269,670	-		PFLU_RS14630	0.43	-2.6
3,269,763	+		PFLU_RS14630	0.56	-1.4
3,269,763	+		PFLU_RS14630	0.56	-1.1
3,269,763	+		PFLU_RS14630	0.56	-0.9
3,269,763	+		PFLU_RS14630	0.56	-1.1
3,269,763	+		PFLU_RS14630	0.56	-0.9
3,269,764	-		PFLU_RS14630	0.57	+0.9
3,269,764	-		PFLU_RS14630	0.57	+0.9
3,269,764	-		PFLU_RS14630	0.57	+0.9
3,269,998	+		PFLU_RS14630	0.90	+2.7
3,269,998	+		PFLU_RS14630	0.90	-2.0
3,269,999	-				+0.3
3,269,999	-				-0.4
3,269,999	-				+0.7
3,269,999	-				+0.9
3,269,999	-				+1.2
3,270,067	+				+0.4
3,270,067	+				-1.7
3,270,067	+				-1.1
3,270,067	+				-0.2
3,270,067	+				-1.7
3,270,067	+				+0.3
3,270,067	+				-0.7
3,270,067	+				-1.1
3,270,068	-				-0.9
3,270,068	-				+1.3
3,270,068	-				-0.1
3,270,068	-				-0.7
3,270,068	-				-0.1
3,270,068	-				-0.1
3,270,068	-				+3.1
3,270,068	-				+0.3
3,270,126	-				+0.6
3,270,126	-				+0.9
3,270,194	+				+2.9
3,270,194	+				+1.3
3,270,245	+				-2.0
3,270,245	+				+1.3
3,270,245	+				+1.9
3,270,245	+				+1.6
3,270,245	+				-1.6
3,270,246	-				-1.6